Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0890 ATGAGCAGCAATATCAATAATTCAGCTCTCTCACCTGAGTCTCACAGAACTGGTGTTAGAACCTCTGGTTACCATATTCCCACCCATAGGAACTCTTTCGAGGTGTCTGCGTTGTCCCGGTCTCCTTCTACACGTACCATTCCTCCTCAGATGACACCAAGTCCACTGAATCCTCTGTGGCATATGGGAGATAGAAGGCAAGCAGGGCTCTACAGTATACCTGAAAGTGACTCTTACGAGGTGCCCGTGTACCACCAAGCTTCTTCAAGACATGCCACTACTGTTCAGGCGACACCAAGTTCACAGAATCCTCCGTGGTATCTGGCAGATAGAAGGCATGCAGGACTCTACAGTACACCTGATGACTCTTATGAGGTGCCAGTGTTCTACCGATCTTCTTCCAGGCAAGCCACCCCTTATTTTCAGGATGAGAGAACATCAAATGCAGTGAATCATCCACGATTTCTGGAAGACAGTTTTCCAGCACAACCGCACATGCTCAATGGAGATACAGGAATGGGATTCAACCACAGGGTCAGAGAAACTCACCGGCCATCAGTTCCGGCTCGAAGATCCGCACGCCAATCAGACACACAAGCTCCAACGGCGATAGAAAATCCCAGATCTAGGGCATTGAGCAAGCTGAAGAAAGAAATCTACGAACCAACTATTCCAAGTTCAAAAATGCTTGCGAAGAAATTGAGCTTCTATTACAGAGATTCGAAAGGTGTGAATGCGTTGAAGGAGATGGAAAACAAGGAAAAGAACGAAGAGGGAAAGAGGTGCGCGGTGTGCTTAGAGGATTTCGTGCCGAAACAGGAGGTAATGGTGACGCCTTGCAAGCACATGTTTCATGAGGATTGTATAATGCCATGGCTGAGAAGCCAAGGTCAGTGTCCGATCTGTAGATTTGTGATCTGCGAGAAAGAGAGGGAGAATCCATTGCCGGTGAACGACAATGAAATTGGAACCAGTTTCGTAATAGCAGGCGAGCTTATGTCTATTGTGAGGGCCATGGAAGAAGCCTTCCGATTCGGTCCTGAAACTCACTGA 1053 0.4767 MSSNINNSALSPESHRTGVRTSGYHIPTHRNSFEVSALSRSPSTRTIPPQMTPSPLNPLWHMGDRRQAGLYSIPESDSYEVPVYHQASSRHATTVQATPSSQNPPWYLADRRHAGLYSTPDDSYEVPVFYRSSSRQATPYFQDERTSNAVNHPRFLEDSFPAQPHMLNGDTGMGFNHRVRETHRPSVPARRSARQSDTQAPTAIENPRSRALSKLKKEIYEPTIPSSKMLAKKLSFYYRDSKGVNALKEMENKEKNEEGKRCAVCLEDFVPKQEVMVTPCKHMFHEDCIMPWLRSQGQCPICRFVICEKERENPLPVNDNEIGTSFVIAGELMSIVRAMEEAFRFGPETH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0890 350 MobiDBLite consensus disorder prediction 24 47 - -
Alju10g0890 350 FunFam RING/U-box superfamily protein 246 320 - -
Alju10g0890 350 MobiDBLite consensus disorder prediction 1 59 - -
Alju10g0890 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 307 IPR013083 -
Alju10g0890 350 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 103 304 - -
Alju10g0890 350 MobiDBLite consensus disorder prediction 1 18 - -
Alju10g0890 350 ProSiteProfiles Zinc finger RING-type profile. 262 303 IPR001841 -
Alju10g0890 350 SUPERFAMILY RING/U-box 253 311 - -
Alju10g0890 350 SMART ring_2 262 302 IPR001841 -
Alju10g0890 350 MobiDBLite consensus disorder prediction 182 209 - -
Alju10g0890 350 Pfam Ring finger domain 261 303 IPR001841 -
Alju10g0890 350 MobiDBLite consensus disorder prediction 191 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0890 Alju-ChrAlju10 8160044 8163759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0890 206 346 C3H Transcription Factor Family AT3G58720 46.259 9.49e-40 139