Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0872 ATGGAATCACATCAGATTTTCAGTTACAGTGAGACTGATATTAATTCATCATCTCATCCTGGTTTTTCGTCGGTACCTAGCAGGCTGCTTGAATCCTTGAAAATCGACTTAGGAAACTCGCCTAATTCCTCCTTTTCCAACCACTTTGATTCTGATTCTCTTTCAACACTGAGTGACAGCCAGGATAATAATAAATACAGTTATAGTGAGATCCTTTCTGGTTTGAGCCCTTCTTGTGACTCTTCGCTGGAAACCAATCACAATTGGCACAATTCAACTTCGTCGTCCATCGATTATCGCCAAGGTGGACCGCGTCTATATTCTTCTGCTAGGAGCTCTCTTCTAAATGATGTAAATTGCAGCCAGAAAATCAGACATGTTCTGCTAGAAATAGAATCAACTCTGATGGCCCCTAACAATGGTAATGATGATGCAACCATATCAAATAGGCCTTTTACCGAGAGCAGGCCGATGACTTCTGGCTTTAGCAACATATCTTGGAGTAATGACCAGAGTTTACTGAATTTTCAAAATCAACCGCCATCTTTTGCTTCTAGTAGTCAGCAGTTGAGTGAAGCTGCACATACTGATAAACGTCAGAAAGCAATAGAGGAAGAACTGGTGCAAGGCTTTCCACCGAGTAATTTGAGGCAGTTGTTGATTGCATGTGCAAAAGTGCTTTCAGAAAACAACATGAAATATTTTGATGAGTTGATTGAAAGGGCTAGAAGTTCTGTGTCTATTACCGGCGAGCCAATCCAAAGACTCGGTGCTTACTTGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCTGGGCACAACATCTATCAATCTCTCCAGTGCAAAGAGCCAGAAGGCAAAGACTTACTCTCTTATATGCACATGCTTTATGAAATCTGCCCTTACTTGAAGTTCGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAGAAATGAGGACCGTATTCACATCATAGACTTTCAGATTGCTCAGGGAAGTCAATGGATTCCTCTCCTTCAAGCCCTTGCAGCTAGACCTAGTGGAGCCCCCTATGTTAGGATCACAGGGATTGATGATCCTGTCTCTAAGTATGCTCGGGGTGATGGGCTAGAGGCGGTTGGTAAACGGTTGGCCATGATATCTGACAAGTTTCACATCCCGGTTGAGTTTCATGGATTGCCGGTTTTTGGTCCTGATGTGACAAGGGATGTGCTTGACATCCAGCCCGGGGAGGCTTTGGCGGTGAACTTTCCTTTGCAGCTCCATCACACGGCTGATGAAAGTGTTGATGTGAATAACCCAAGAGATGGGCTTCTGAGAATGGTAAAATCACTATCTCCCAAGGTGGTCACACTGGTGGAACAAGAATCAAACACCAACACGACTCCTTTCTTCAACAGGTTCATAGAAACCTTGGATTACTACTTGGCAATGTTCGAGTCCATTGATGTCACCCTCTCGAGAGAGGACAAGAGAAGGATTAACATTGAACAACATTGTTTGGCCAGGGATGTTGTGAATGTCATTGCTTGTGAAGGGAAGGAAAGGGTTGAGCGACACGAACTATTTGGCAAGTGGAAGTCTAGGTTGACCATGGCCGGTTTCCAACAATATCCGATGAGCACCTATGTGAATTCAGTTATTCGGAGCCTGCTGAGATACTATTCAGGGAATTATACACTGGTAGAGAAGGATGGTGCTATGTTGTTGGGGTGGAAGAGTAGAAATCTGATATCAGCCTCAGCATGGCATTGA 1761 0.4424 MESHQIFSYSETDINSSSHPGFSSVPSRLLESLKIDLGNSPNSSFSNHFDSDSLSTLSDSQDNNKYSYSEILSGLSPSCDSSLETNHNWHNSTSSSIDYRQGGPRLYSSARSSLLNDVNCSQKIRHVLLEIESTLMAPNNGNDDATISNRPFTESRPMTSGFSNISWSNDQSLLNFQNQPPSFASSSQQLSEAAHTDKRQKAIEEELVQGFPPSNLRQLLIACAKVLSENNMKYFDELIERARSSVSITGEPIQRLGAYLVEGLVARKEASGHNIYQSLQCKEPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWIPLLQALAARPSGAPYVRITGIDDPVSKYARGDGLEAVGKRLAMISDKFHIPVEFHGLPVFGPDVTRDVLDIQPGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAMFESIDVTLSREDKRRINIEQHCLARDVVNVIACEGKERVERHELFGKWKSRLTMAGFQQYPMSTYVNSVIRSLLRYYSGNYTLVEKDGAMLLGWKSRNLISASAWH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0872 586 MobiDBLite consensus disorder prediction 1 21 - -
Alju10g0872 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
Alju10g0872 586 MobiDBLite consensus disorder prediction 178 198 - -
Alju10g0872 586 MobiDBLite consensus disorder prediction 138 157 - -
Alju10g0872 586 MobiDBLite consensus disorder prediction 178 193 - -
Alju10g0872 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 582 IPR005202 -
Alju10g0872 586 Pfam GRAS domain family 216 585 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0872 Alju-ChrAlju10 7949252 7951012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0872 215 585 GRAS Transcription Factor Family AT5G48150 63.172 5.41e-172 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju10g0872 GRAS 1.9e-124 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0657 02 4790253 4792004 Alju10g0872 10 7949252 7951012 CCT
Alju10g0872 10 7949252 7951012 Alju10g0872 10 7949252 7951012 ECH