Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0849 ATGTCCGCTATGCCGTTGGGGCCGCACCAGCACCAACCGCTGGCGGCGGCAGCACCCCAGCCTCCACCTTCGTTGCCGGCACAAGCTGAGAATGACAAGGAAATGTCAGCCACAGTCCTTGAGGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGGGAACCTAAGCAGACCATTAGTTACATGGCAGAACGTGTTGTTGGCACCGGTTCATTTGGAATTGTTTTCCAGGCAAAGTGTTTGGAGACTGGGGAAGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAGCTGCAGTTAATGCGTTTGATGGATCACCCAAATGTCATTTCCCTGAAGCACTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTCAATTTGGTTATGGAATATGTCCCTGAAACATTGTACCGAGTTCTAAAACACTATACTAGTATGAATCAAAGGATGCCTCTCATCTATGTGAAACTTTATACATATCAAATCTTCAGGGGATTAGCATACATCCATACAGTACCAGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTGATCCTCTCACTCATCAAGTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTCAATGGTGAATCAAACATTTCATACATATGTTCGCGTTACTATCGGGCTCCAGAGCTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATTTGGTCAGGTGGTTGTGTCCTGGCTGAACTGCTTTTAGGTCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTCCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCTCAGGTTAAAGCTCACCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCGATTGACCTTATATCAAGGCTTCTCCAATATTCGCCAAGTCTTCGCTACACTGCGCTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGGGAGCCCAATGCCCGACTGCCCAATGGCCGTCCACTGCCCCCACTTTTCAATTTCAAACAGGAACTGTCTGGAGCATCGCCTGAATTGATAAATAGGCTCATCCCAGAGCATATTAGGCGGCAGATTGGCCTCAACTTCCCTCATCCGGTTGGTACATAG 1227 0.458 MSAMPLGPHQHQPLAAAAPQPPPSLPAQAENDKEMSATVLEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYTSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGESNISYICSRYYRAPELIFGATEYTTSIDIWSGGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLISRLLQYSPSLRYTALQACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELINRLIPEHIRRQIGLNFPHPVGT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0849 408 MobiDBLite consensus disorder prediction 1 33 - -
Alju10g0849 408 Pfam Protein kinase domain 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0849 408 SMART serkin_6 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0849 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Alju10g0849 408 FunFam Glycogen synthase kinase-3 beta 52 147 - -
Alju10g0849 408 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0849 408 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 32 397 - -
Alju10g0849 408 Gene3D Phosphorylase Kinase; domain 1 53 147 - -
Alju10g0849 408 FunFam Shaggy-related protein kinase kappa 148 395 - -
Alju10g0849 408 Gene3D Transferase(Phosphotransferase) domain 1 148 395 - -
Alju10g0849 408 CDD STKc_GSK3 63 355 IPR039192 -
Alju10g0849 408 ProSitePatterns Protein kinases ATP-binding region signature. 74 98 IPR017441 GO:0005524
Alju10g0849 408 SUPERFAMILY Protein kinase-like (PK-like) 67 378 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0849 Alju-ChrAlju10 7635054 7640031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0849 72 390 MAP Kinase Gene Family AT3G59790 35.329 6.07e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Alju10g0849 Pkinase 2.8e-64 CL0016