Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0840 ATGGCTGAGAGTGAGAGATCAATTTACATGTCCCACGAAAACAAGAACGAAGATAGTAACAACAACAGCAACAATATCACCACCAAACCATCTTCTTCTTCTCTGCTTCTTCAAAAGGGTTCATTGTTTGACCTGAACGAAGAAGCTATGGAGGATCTTGGTGGTGGAGTTAATAATGGAGGATCGTCTTCATCGTCGTCGTCAGGAGAAGGTAATGTGAGTAGCAACAACTCAAGTTCAGAAGTGAAAGAGAGAGCAAGTAGTAGTGTGAGGCAATATGTAAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTGCTGTTGAAAGGCTTGGTGGACAGGAAAAAGCAACGCCCAAGTTAGTTTTACAGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGCCATCTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCAAGTTTTATCCCAAAATAGGGCAACATTAATAATGCAAGGACAAAGAAATCATATTCTGGATATGTACCAAAGATTCAGTGCTCATCATCAAGGAGGAGGACAATTTGGGATTGATGACTATCTCCCAACAATACCTCTCGTTATGAAGCCAATGTTTGACTTTAAATCTCATGGTTATTCAAGATATCAACCAGGGACAAGATCAAGTTCATTAGTAGTAGGGTGGAGCAACAACGACTTAGGTTTGTGTGAGGCTGGTAATAAAGGCAGAAGGATGCTGATTCAGAGGAACAAGATTATTGGAGGGTGTCACGTATTTGAGGTTAACGATGCTAATAATAATAATACTCCTATTCGAATAAGAAATAATGGACCTCTTAGGCCAAATCTATTTCTCGAAGACAAGAAATGGCCTCCTCGTGAAAGAAATGAAAAACCTTATTGGGATGACAAATATTGTTCCCGGAAAAACCTCACAAAGTGCTTCATCAATCGAAACCTTCAATTTGACACCCAGGTTCATCATCATGATAAAAAAGATGTGACGCTACATTTAATGAGATATCAGAATCATTTCTCAGAAGCAGGTGAAGTCAAAGGTCACTTAGTAGATAGTTTGAAGGAGATGAAGGAACCGACCAGTTTTCTAAAGTCATGTTTTTTAACCCAAGATTCTGCCAACAACAATCCTGGTCCTCCAGGCAATGACGGAGGAATCAATACGATGTTGTCTCTTTCATTATAA 1224 0.4003 MAESERSIYMSHENKNEDSNNNSNNITTKPSSSSLLLQKGSLFDLNEEAMEDLGGGVNNGGSSSSSSSGEGNVSSNNSSSEVKERASSSVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLIMQGQRNHILDMYQRFSAHHQGGGQFGIDDYLPTIPLVMKPMFDFKSHGYSRYQPGTRSSSLVVGWSNNDLGLCEAGNKGRRMLIQRNKIIGGCHVFEVNDANNNNTPIRIRNNGPLRPNLFLEDKKWPPRERNEKPYWDDKYCSRKNLTKCFINRNLQFDTQVHHHDKKDVTLHLMRYQNHFSEAGEVKGHLVDSLKEMKEPTSFLKSCFLTQDSANNNPGPPGNDGGINTMLSLSL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0840 407 Gene3D - 98 155 - -
Alju10g0840 407 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 70 180 IPR046955 GO:0003700
Alju10g0840 407 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Alju10g0840 407 MobiDBLite consensus disorder prediction 1 91 - -
Alju10g0840 407 MobiDBLite consensus disorder prediction 384 407 - -
Alju10g0840 407 MobiDBLite consensus disorder prediction 57 91 - -
Alju10g0840 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Alju10g0840 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Alju10g0840 407 MobiDBLite consensus disorder prediction 14 40 - -
Alju10g0840 407 FunFam Myb family transcription factor 97 155 - -
Alju10g0840 407 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0840 Alju-ChrAlju10 7532274 7535027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0840 87 189 G2-like Transcription Factor Family AT2G42660 62.136 6.36e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju10g0840 Myb_DNA-binding 4.4e-07 CL0123