Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0833 ATGTTTTCTCAAATCACAAGTCACGCACTTCAAGAACTGGTAATTCTTTACACAGCTCCGATCATTCCTCCGCTGTCTGAAATCGCCGGAAAGAAAGAAACGATGCGTCCTCCGGTCAAGAAAACCAGCTTTAGCAGAGGTCAGGGCGTGGAAGTTTCCGTCAAGGAAGACGGATTCCATGGATCGTACTTCGAAGCGAAGGTGGTTTCTCAACTCGATAATGGGCTCTACGTCGTTAAGTACGAGACGTTGCTCGATGACCACAACGAGTCCCAATTTCTGACAGAAACTGTTTACCCTAAGGAGCTTCGTCCCCTGCCTCCGGTCATCTCTGTTCGCCGGTTTTCAGTTAATCAGAAGGTCGATGCCTTCGACAACGACGGTTGGTGGCTTGGCGTTATCACCGGAAAAGATGGTCCCGATAGGTATTTAGTGTATTTCGCCTCCACCGATCAGGAGATCGCGTACCCTATCTCGCAAATTAGGGTTCATCAGGACTGGATGAACGGCAAGTGGGTTCGGCCTAAGAAAGTTGGGTCTTAG 543 0.4936 MFSQITSHALQELVILYTAPIIPPLSEIAGKKETMRPPVKKTSFSRGQGVEVSVKEDGFHGSYFEAKVVSQLDNGLYVVKYETLLDDHNESQFLTETVYPKELRPLPPVISVRRFSVNQKVDAFDNDGWWLGVITGKDGPDRYLVYFASTDQEIAYPISQIRVHQDWMNGKWVRPKKVGS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0833 180 CDD Tudor_Agenet_AtDUF_rpt2_4 117 163 - -
Alju10g0833 180 CDD Tudor_Agenet_AtDUF_rpt1_3 44 108 - -
Alju10g0833 180 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 41 177 - -
Alju10g0833 180 Gene3D - 34 115 - -
Alju10g0833 180 SMART agenet_At_2 42 111 IPR014002 -
Alju10g0833 180 SMART agenet_At_2 113 169 IPR014002 -
Alju10g0833 180 Pfam Agenet domain 47 108 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0833 Alju-ChrAlju10 7344960 7345502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0833 56 167 PHD Transcription Factor Family AT5G58610 27.068 5.70e-09 52.8