Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0827 ATGTCGCAGACTGGGAAGTCAGTGCAGGAACTGGGGTTCGATTCCCTCACTTCTCGATTCCGCGATTTGTTGGGTTCTGACGAAAACAAGCCTGATTTTAAAGAACTCGATCTAGGTTCTCCTGTTTCTCCATTGAAAACCCCTGCCTCTGTTAATGCTGCCGGCGCCGGCGCTTCTAACACCTCCAGCTGCAGCTCGACCTCCTCCGCTGGCTCGGTTTCCGGCAGCAGAAATACTGCCTCCAAGTTGCCCAGTAAACCAGACGGGAAGCCCAGGAACAACTCCGGCGAGCTCCGTGAGACCAACTCAAACGCCTCCGAGAGCCTTCAATCAGCTTCGGCATCCCGAAGCACCAAGCCTGGTCATAGAAGATCGGTTTCAGCTGGAGCCCCGTTAATATACTCCGGTGGAAGTTCTAGCAGCTTGGGGAATAACAGTAATTCAAATGGTGCAAATTCAGGGACTAATTGTCTCCCAACCGGCAATATTTGTCCGACAGGGAGGATCTCAAAAACCGGTTTGGCGCCTAGAACGCCCAATAGAACTGATGTTTTGGGTTCAGGGACGGTAAACTACGGCCGAGGCAACATAATGCGCGGTGGCGGGAAATGGGGCAATGGAGGGCACGCAATCGTTGATGACAATGTCGCCGGAAATTCTCAGCTCGGAGGGATGTCGGGCTTTGTGAAACAGGCGATGAGTGGTTCGGATCCTGAGGAGGTGAAAAGAGCCGGAAATGAGCTATACAGAAGCGGTTACTTTGCGGAGGCATTGTCGTTGTACGATCGCGCAATTTCCATATCACCCAATATTCCTGCCTACCGGAGTAATCGGGCGGCAGCGTTGACGGCGCTGGGGAAGTTGGCTGCGGCGGCGAAGGAGTGCGAGGAGGCTGTGAAATTGGACCCTGGTTATGCCAGGGGTCATCAGAGACTGGCTTCGCTTCATCTGCGCTTTGGGCAGGTTGAGAATGCACAGAGCCATCTCTGTGTCCCTGGAAAACAGGTGGATCAATCTGAACTGTACAAGTTGAAACTCTTGGAGAAGCATTTGAAACGATGTGCAGAAGCACGAAATATTGGTGATTGGAAGAACACACTAAGGGAATCAGACGCAGCCATTGCTGTTGGAGCAGATTTCTCGCCCCAGCTTGTTGCTTGTAAATCTGAAGCCTATTTGAAACTTCATCTACTTGAGGACGCTGAGTCTACCCTCTCAAACATTCCTAAGCTGGAGGGTTGTTCTCAAACCAAGTTTTTTGGTATGATTGGTGAAGCTTATGTTCCCTTTGTTCGAGCTCAGGTTGAGATGGCCTTAGGAAGGTTTGAGAATGCAGTAGCAGAAGCAGAAAAGGCTAGTTTGATAGATTATAGCAATGTGGAAGTTGCGAGGGTAGTAAATACTGTGAAAATGGTGGCAAGGGCTCGCTCTCGAGGCAATGATCTTTTTGGCCATGGAAAATTTTCTGAAGCTTGCTCTGCTTATGGAGAAGGCCTTAAATATGATAGTTCCAACTTTGTTTTGTTCTGCAATAGAGCTGTTTGCTGGTCTAAACTTGGACTCTGGGAAAAGTCTGTTGAGGACTGCAACCATGCTCTGCTAATACTACCAAACTGTACCAAGGCCCTTCTCCGTAGGGCTGTCTCAAATTCAAAGCTTGAAAGGTGGGGAGATGCTATAAGAGATTATGAGGCATTAAAGCGGGAACTTCCTGGAGATAGTGTAGTTGCTGAGTCCCTCCATCAGGCTCAGCTTGCATTAAGGAAATCTCGTGGCGAAGATTGTGGTTCAAAACTTGTTCTTGAGGTTGAAGAGGTCTCTACATTAGATAGATTAAAAGCCGCAATTGCTTCTTCAGGCATCTCAGTGGTTCATTTCAAGAAGGCATCTAATGAACAATGTCAAGAAATATCCCCGTTCATAAATACGCTCTGCATTCGATACCCGTATGTTAAATTCATCAAGGTGGATGTGGAAGAGTGTACAAGTATAGCAAAAGCTGAGAGCATAAGAGCCGTGCCAACCTTCAGAATCTATGCAAATGGAGAGAAGGTGATGGAGATGATCAGGCCAAGCCATCAGTTGTTGGAGGACTCTGTGAGGAACTGTTGTAATCTCTAG 2121 0.4833 MSQTGKSVQELGFDSLTSRFRDLLGSDENKPDFKELDLGSPVSPLKTPASVNAAGAGASNTSSCSSTSSAGSVSGSRNTASKLPSKPDGKPRNNSGELRETNSNASESLQSASASRSTKPGHRRSVSAGAPLIYSGGSSSSLGNNSNSNGANSGTNCLPTGNICPTGRISKTGLAPRTPNRTDVLGSGTVNYGRGNIMRGGGKWGNGGHAIVDDNVAGNSQLGGMSGFVKQAMSGSDPEEVKRAGNELYRSGYFAEALSLYDRAISISPNIPAYRSNRAAALTALGKLAAAAKECEEAVKLDPGYARGHQRLASLHLRFGQVENAQSHLCVPGKQVDQSELYKLKLLEKHLKRCAEARNIGDWKNTLRESDAAIAVGADFSPQLVACKSEAYLKLHLLEDAESTLSNIPKLEGCSQTKFFGMIGEAYVPFVRAQVEMALGRFENAVAEAEKASLIDYSNVEVARVVNTVKMVARARSRGNDLFGHGKFSEACSAYGEGLKYDSSNFVLFCNRAVCWSKLGLWEKSVEDCNHALLILPNCTKALLRRAVSNSKLERWGDAIRDYEALKRELPGDSVVAESLHQAQLALRKSRGEDCGSKLVLEVEEVSTLDRLKAAIASSGISVVHFKKASNEQCQEISPFINTLCIRYPYVKFIKVDVEECTSIAKAESIRAVPTFRIYANGEKVMEMIRPSHQLLEDSVRNCCNL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0827 706 Gene3D Glutaredoxin 593 703 - -
Alju10g0827 706 ProSiteProfiles TPR repeat profile. 238 271 IPR019734 GO:0005515
Alju10g0827 706 SUPERFAMILY Thioredoxin-like 511 693 IPR036249 -
Alju10g0827 706 Gene3D Tetratricopeptide repeat domain 236 592 IPR011990 GO:0005515
Alju10g0827 706 SUPERFAMILY TPR-like 237 461 IPR011990 GO:0005515
Alju10g0827 706 FunFam TPR repeat-containing thioredoxin TTL4 599 704 - -
Alju10g0827 706 MobiDBLite consensus disorder prediction 168 187 - -
Alju10g0827 706 MobiDBLite consensus disorder prediction 53 83 - -
Alju10g0827 706 Pfam Thioredoxin 613 690 IPR013766 -
Alju10g0827 706 SMART tpr_5 506 539 IPR019734 GO:0005515
Alju10g0827 706 SMART tpr_5 426 459 IPR019734 GO:0005515
Alju10g0827 706 SMART tpr_5 472 505 IPR019734 GO:0005515
Alju10g0827 706 SMART tpr_5 540 573 IPR019734 GO:0005515
Alju10g0827 706 SMART tpr_5 272 305 IPR019734 GO:0005515
Alju10g0827 706 SMART tpr_5 238 271 IPR019734 GO:0005515
Alju10g0827 706 Coils Coil 432 452 - -
Alju10g0827 706 MobiDBLite consensus disorder prediction 23 132 - -
Alju10g0827 706 MobiDBLite consensus disorder prediction 96 122 - -
Alju10g0827 706 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 26 701 IPR044534 -
Alju10g0827 706 CDD TRX_family 612 697 - -
Alju10g0827 706 Pfam Tetratricopeptide repeat 244 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0827 Alju-ChrAlju10 7283202 7286345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0827 239 329 U-box Gene Family AT3G07370 28.571 1.60e-06 48.5