Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0826 ATGGAAGAATTTGACTGGAGCTCTGGTGTTTGTGAAAATGCCTCAGAGAGAAGTTCTGATTGTTTTCTGGATAACTCTGCTGTAATAGGAAGAGGGTTTGCTTCATCTTCATCTCTGGTGTTGGACGGAGAGAAGGAAGAGCTTGTGGCTGCTCCGGTCAAACTGGAACGCAAGATTGTGTCCACTGAGAGAAGTGTTGAAAGTTTGAAGAACCATAGCGAGGCAGAGAGGAGGAGGAGAGCGAGGATTAATGCACATCTTGACACGCTTAGGGGTGTAGTTCCTGGTGCTAAGAAGATGGACAAAGCATCATTACTTGGCGAGGTTATCAGAAATTTGAAAGAGCTGAAAAGGAATGCGGCACAAGCATGTGAGGGTTTGATGATGCCAAAGGACAGTGATGAAATAAGAGTTGAAGAACAAGAGGATGGTTCTAATGGATTCCCTTATTCGATCAAAGCATCACTGTGTTGTGAATATAAACCAGGGTTGTTGCCTGAATTAAGTCAAGCACTTGATGCTCTTCATCTTAAGATAATGATGGCAGAAATTGCAACCTTGGGAGGAAGAATGAAGAATGTGTTTGTTATAATTAGCTATGAAGAACACAACATTGAAGATTCTGCATATCGTCAGTTTCTTGCAGTGTCTGTTCATCAAGCTATTAGGTCTGTACTTGATAGATTCTCTTGTTCTGAAGATCTGTTAGGAACCAGAAAGAGACGGAGACTTTCTATATTCAGTTCATCACCTTTAGGAGATTTCTTATGA 771 0.415 MEEFDWSSGVCENASERSSDCFLDNSAVIGRGFASSSSLVLDGEKEELVAAPVKLERKIVSTERSVESLKNHSEAERRRRARINAHLDTLRGVVPGAKKMDKASLLGEVIRNLKELKRNAAQACEGLMMPKDSDEIRVEEQEDGSNGFPYSIKASLCCEYKPGLLPELSQALDALHLKIMMAEIATLGGRMKNVFVIISYEEHNIEDSAYRQFLAVSVHQAIRSVLDRFSCSEDLLGTRKRRRLSIFSSSPLGDFL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0826 256 CDD ACT_UUR-ACR-like 155 226 - -
Alju10g0826 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
Alju10g0826 256 Gene3D - 62 124 IPR036638 GO:0046983
Alju10g0826 256 SMART finulus 73 122 IPR011598 GO:0046983
Alju10g0826 256 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Alju10g0826 256 PANTHER TRANSCRIPTION FACTOR BHLH30 31 246 IPR045847 GO:0003700|GO:0006355
Alju10g0826 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0826 Alju-ChrAlju10 7264948 7266953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0826 54 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.306 1.79e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju10g0826 HLH 8.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0826 10 7264948 7266953 Alju10g0826 10 7264948 7266953 ECH