Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0813 ATGAGAAAGCATAAAGGTGTGGGAATGAAGAGTGCTGCTGGAGGAGGAGGAGGAGAGATTGTTCAAGTTCAAGGAGGTCACATTGTTCGATCCACCGGTCGGAAAGATCGTCACAGTAAGGTTTATACCTCCAAAGGTCCTCGAGATCGAAGGGTTCGTTTATCGGCCCAAACAGCGATTCAGTTCTACGATGTTCAAGACCGGCTCGGCTACGACCGGCCCAGCAAAGCCGTCGATTGGCTCATCAAGAAGGCCAAATCCGCCATTGATAAGCTTGCCGAGCTTCCTCCATGGCAGCCTGAAGCCGAAGAAACTCACAAAGAGGAAAACCCTGAGGATTCTGAGGCTCCTTCGGGCAACAAGAACCGTCCTCTGCTTCCCCTAATTCTCACCACCACTGACCAAAAATCACCCTGCTTGCTCCTTCACTCATCAGGAGGAGCATTTTGA 450 0.5111 MRKHKGVGMKSAAGGGGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAQTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWQPEAEETHKEENPEDSEAPSGNKNRPLLPLILTTTDQKSPCLLLHSSGGAF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0813 149 Pfam TCP family transcription factor 33 118 IPR017887 -
Alju10g0813 149 MobiDBLite consensus disorder prediction 93 129 - -
Alju10g0813 149 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 117 IPR005333 GO:0003700
Alju10g0813 149 MobiDBLite consensus disorder prediction 100 116 - -
Alju10g0813 149 MobiDBLite consensus disorder prediction 1 50 - -
Alju10g0813 149 ProSiteProfiles TCP domain profile. 34 92 IPR017887 -
Alju10g0813 149 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0813 Alju-ChrAlju10 7134856 7136089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0813 12 100 TCP Transcription Factor Family AT3G15030 87.640 1.77e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju10g0813 TCP 2.2e-32 No_clan