Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0812 ATGAGCAGTCCACAGGAAGGCGGCGGTTTTCCGCCGTTCGACTTTCCGGTAAATTTACCGAGAAGACCCGACTTCCATGACGGCAATAACTTGAACAGCAAGATCTTGTACGTAGCCATTATCTGCTTATCAATCGTCTTAGTCCTCGTCTTTGCCCTTCATCTCTACGCCAGGCACGTCCTCCGCCGCCAAGCCCGCCGTCGCGCCGCCATCCACCATCTCAGCCTCGCCGTGGCTAGATACTCCTCCGGTGACGATCCGCCCATTAACACCGGCCTCGACCCCACCGTCATTGCCTCTCTTCCCACCTTCGTCTTTAAACGAAGACACGACAAGTGTCACAACCAAAACAAGGACGCCGACGGCGGCCACCTCCGCCGTGGCGATTCTTCCTCTGTTATGGAATGCTCTGTTTGTTTGAGCAATCTGGAGGATGGAGAAGAAGCGAGGCTGCTTCCTAATTGCAAGCACATGTTCCACGTGGCTTGTATTGACCAGTGGCTGGCGTCTCATTCGACTTGTCCGATTTGTCGGACCATGGCTAAGCCGGTGATTGAGCCTCAGCCGCGTGAGGGTCCGGTCGGGGTCGGGCTTGCCCCGCTGGTGGTGGAACCCACCGCAGAAGGTACATCTGACGGTGGTGGTGGAGCTAAAAGTAGCGGTTCATCAGTTTCAAGGTTGAGCTCGTTTAGAAGAATACTAAGTAGAGAAAGATCGTCCAGAAGAATTCAACCTTCTTCTTCTTCTTCCTCTACCTATGATGACAGTATTGATCGTGATTTGGAGAGACAGTGA 795 0.5358 MSSPQEGGGFPPFDFPVNLPRRPDFHDGNNLNSKILYVAIICLSIVLVLVFALHLYARHVLRRQARRRAAIHHLSLAVARYSSGDDPPINTGLDPTVIASLPTFVFKRRHDKCHNQNKDADGGHLRRGDSSSVMECSVCLSNLEDGEEARLLPNCKHMFHVACIDQWLASHSTCPICRTMAKPVIEPQPREGPVGVGLAPLVVEPTAEGTSDGGGGAKSSGSSVSRLSSFRRILSRERSSRRIQPSSSSSSTYDDSIDRDLERQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0812 264 Pfam Ring finger domain 135 178 IPR001841 -
Alju10g0812 264 SMART ring_2 136 177 IPR001841 -
Alju10g0812 264 MobiDBLite consensus disorder prediction 240 254 - -
Alju10g0812 264 MobiDBLite consensus disorder prediction 205 264 - -
Alju10g0812 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 183 IPR013083 -
Alju10g0812 264 MobiDBLite consensus disorder prediction 213 230 - -
Alju10g0812 264 SUPERFAMILY RING/U-box 135 188 - -
Alju10g0812 264 CDD RING-H2_EL5-like 135 178 - -
Alju10g0812 264 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 29 233 - -
Alju10g0812 264 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0812 Alju-ChrAlju10 7127719 7128513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0812 30 246 C3H Transcription Factor Family AT2G42360 46.396 7.09e-52 167