Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0808 ATGAGTCAGAGAGAAAAAAGTGTTTCCATGGCAAAATTACCTCCCAAGATCCCAAGCACCAAGCTGGGTTGGTCTGAACTTCCTTATTCTTCCCCACCGGAGATTCCTTCCGGCGCAAGTTTCTCACTGGATAATGCCGCTGCTGCCACTCAGGACCCTTCTTGGGCAGATGAATTCCACGATTTCTCGTTGGCGAGCCGCCAGGGCCAATGCTGGTCGGTGAGCGATTACATTACCTTCCTCGAGGATCCCGAGTTGCATGTCAATTCAAGAAATGTTCGACCCAGGTTTGAGGCAGAGAATGAGTTTGATAAATTTGATGATGAGAAATTCATGACCATGTTTGATAATGATGCATCTGGGGCTGCTAATCCTCGAACTATGTCCTCACCAAAATCTTGTAGCCCTTCTGATCATAAAAGCAATATTAAAGATGAGACAGAAATCACGAACCAAGTCCAGCAACACCAGAACCTGCACAATCAGAACGAAGATCAACAACATCAGCATTTGAAAAATGAACCTGATGAGGTTGAAAGTCAGATAACCAAACAGCAGAAAATACATCCTTCAAATAATACATTAGCAACTTCTTCCTCTGACAAGATCAATGATCCTAAGAGGGTCAAAAGAATATTGGCAAATAGGAAATCTGCACAAAGATCACGAGTGAGAAAGCTGCAATATATAAACGAGCTAGAACGTAGTGTAACTTCATTACAGGCTGAAGTATCCGTGCTGTCTCCAAGGGTTGCATTTTTAGATCGGCAACGCTTGCTTCTAAGTGTTGACAATGATGATCTTAAGCAACGAATCGCTGCCCTCGCTCAAGACAAGATCTTCAAAGATGCTCTTCAAGATGCACTCAGGAGGGAGATAGAGAGGCTAAGGCAAGTGTGTCACCAACAAAAACTCAACAACATTGAAAATGTTGCAGGTTCAACATCCCCCTCACCAAATCCAAAATGTCACGGTCAGGCTGAAACGGAACAGCTTCGTCTCAACGTCTGA 1011 0.4392 MSQREKSVSMAKLPPKIPSTKLGWSELPYSSPPEIPSGASFSLDNAAAATQDPSWADEFHDFSLASRQGQCWSVSDYITFLEDPELHVNSRNVRPRFEAENEFDKFDDEKFMTMFDNDASGAANPRTMSSPKSCSPSDHKSNIKDETEITNQVQQHQNLHNQNEDQQHQHLKNEPDEVESQITKQQKIHPSNNTLATSSSDKINDPKRVKRILANRKSAQRSRVRKLQYINELERSVTSLQAEVSVLSPRVAFLDRQRLLLSVDNDDLKQRIAALAQDKIFKDALQDALRREIERLRQVCHQQKLNNIENVAGSTSPSPNPKCHGQAETEQLRLNV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0808 336 SUPERFAMILY Leucine zipper domain 207 261 IPR046347 GO:0003700|GO:0006355
Alju10g0808 336 Coils Coil 286 306 - -
Alju10g0808 336 FunFam Transcription factor VIP1 206 277 - -
Alju10g0808 336 MobiDBLite consensus disorder prediction 118 208 - -
Alju10g0808 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 205 257 IPR004827 GO:0003700|GO:0006355
Alju10g0808 336 MobiDBLite consensus disorder prediction 163 183 - -
Alju10g0808 336 MobiDBLite consensus disorder prediction 147 162 - -
Alju10g0808 336 MobiDBLite consensus disorder prediction 184 202 - -
Alju10g0808 336 Pfam Basic region leucine zipper 205 252 IPR004827 GO:0003700|GO:0006355
Alju10g0808 336 PANTHER BASIC LEUCINE ZIPPER 34 10 318 - -
Alju10g0808 336 Gene3D - 206 277 - -
Alju10g0808 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 210 225 IPR004827 GO:0003700|GO:0006355
Alju10g0808 336 MobiDBLite consensus disorder prediction 120 137 - -
Alju10g0808 336 SMART brlzneu 203 267 IPR004827 GO:0003700|GO:0006355
Alju10g0808 336 CDD bZIP_plant_RF2 208 258 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0808 Alju-ChrAlju10 7103759 7106424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0808 10 284 bZIP Transcription Factor Family AT3G58120 48.123 5.76e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju10g0808 bZIP_2 1.1e-08 CL0018