Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0804 ATGGCGGGACCAATTCTTCGTTCTCTCTGGTCCTCTACCAGAAAATCTTTTTCCTCTTCCCCATCCCTTTTCACCCCATATCATTTATTGCCGCGTACCAACACCGGCTACCGCGCCTTCTCCGCCGCCCCAGCAACCGCCGCCGTGGAACCTAGCAGCGCCCTCAACCCCAGCCGCCTCCGCAACGTCGCCGTGATTGCTCATGTTGACCATGGCAAGACCACCCTCATGGATCGAGTACTTCGTCAGTGTGGCGCCGACATACCCCACGAGCGCGCCATGGATTCCATCAGTCTGGAGCGCGAGCGTGGTATCACGATCGCTTCCAAGGTTACTTCAGTTTCATGGAAGGAAAATGAGCTAAATATGGTTGATACGCCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGAGTTGTTGGTATGGTCGAGGGAGCTGTATTGGTTGTAGATGCTGGTGAAGGCCCACTTGCACAAACAAAATTTGTTTTGGCAAAAGCCTTAAAGTATGGGTTACGACCTCTTCTTCTTTTGAACAAAGTAGACCGACCTTCAGTCTCTGAGGAGAGGTGTAATGAAGTTGAGAGTCTGGTGTTTGATCTTTTTGCCAACCTTGGCGCAACAGAGGAGCAATTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCCACCACCTTTACCAAGGATCCTCCTGCCGAGGCAAAAAATATGTCACAACTTCTTGATGCCATAGTAACTCATGTCCTACCACCAAAAGCAAATATTGATGCGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGATTTCTATCTTGGGCGAATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTAGGTGACAAGGTTCATGGTCTATCTAACAAAGATTCTGGAGTAGTGAAGATTGATGATGGAAAGGTTGTGAAATTAATGAAAAAGAAGGGGACGAGCATGGTTCCAATTGACTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGGTTGACAAGTCCAATTATAGGAAACACCGTAGCAACTGCAGAGATTATGTCTGCATTACCCACAATTGTGCTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAATGACTCTCCTTTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGGAGAATTGGTGATCGGCTGATGGCTGAAGCTGAAACGAACATTGCCATAAATGTGCTTCCTGGCTTATCAGAGTCATATGAAGTTCAGGGAAGAGGAGAGCTACAATTGGGCATCCTTATTGAGAATATGAGGCGTGAAGGATTTGAGTTGTCTGTCTCTCCACCTAAAGTCATGTACAAAGCTGAAAGTGGTGAGAAACTTGAGCCAATTGAAGAAGTTACAATTGAAGTCAATGATGAACATGTTGGGTTAGTTATGGAGGCCTTATCTCATAGGCGAGGTGAAGTTATGGACATGGGTCCCGTTGCAGGAACCGTTGGTCGGGCTAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGTTATAGGAGTGTGTTTAGCAGCGACACGCGTGGAACTGGCTTCATGCACCGTGCTTTCCTTCAGTATGAAAAATTCCGAGGTCCTCTTGGCAATGTCAGGAAAGGAGTACTGGTATCAATGGGTTATGGTACAATTAGAGCTTATGCATTAATGAGCTTAGAAGCTCGTGGGACTTTATTTGTAACCCCAGGAATGGAGACATACGATGGAATGATTATTGGTGAACACTCACGAGATACAGATCTTGATGTCAATCCAGTGAGAGCTAAGGAACTTACAAATATTCGGGCTGCAGGTAGTGATGAAAATATCAAGCTGTCTCCGCCTCGCCTTATGACCCTGGAAGAAGCTATAGGATATGTAGCTTCCGACGAACTTATCGAGGTTACTCCAAAGGCTATACGGCTGAGAAAGAAATATCTTGATGTTAACAAGCGTAAAAGCATGAGTAAAAAGCCAAAGGAATGA 2007 0.4589 MAGPILRSLWSSTRKSFSSSPSLFTPYHLLPRTNTGYRAFSAAPATAAVEPSSALNPSRLRNVAVIAHVDHGKTTLMDRVLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEAKNMSQLLDAIVTHVLPPKANIDAPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDKVHGLSNKDSGVVKIDDGKVVKLMKKKGTSMVPIDCAGAGDIISMAGLTSPIIGNTVATAEIMSALPTIVLDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNIAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKAESGEKLEPIEEVTIEVNDEHVGLVMEALSHRRGEVMDMGPVAGTVGRARLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLQYEKFRGPLGNVRKGVLVSMGYGTIRAYALMSLEARGTLFVTPGMETYDGMIIGEHSRDTDLDVNPVRAKELTNIRAAGSDENIKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKKPKE 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0804 668 CDD BipA_III 367 444 IPR047043 -
Alju10g0804 668 Pfam Elongation factor Tu domain 2 277 350 IPR004161 GO:0005525
Alju10g0804 668 Gene3D - 450 544 - -
Alju10g0804 668 Pfam Elongation factor Tu GTP binding domain 59 252 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 CDD BipA_TypA_II 263 360 IPR047042 -
Alju10g0804 668 Gene3D bipa protein 545 660 IPR042116 -
Alju10g0804 668 FunFam Elongation factor family protein 257 361 - -
Alju10g0804 668 PRINTS GTP-binding elongation factor signature 174 183 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 PRINTS GTP-binding elongation factor signature 102 110 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 PRINTS GTP-binding elongation factor signature 122 132 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 PRINTS GTP-binding elongation factor signature 62 75 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 PRINTS GTP-binding elongation factor signature 138 149 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 Gene3D - 58 256 IPR027417 -
Alju10g0804 668 FunFam GTP-binding protein TypA 545 631 - -
Alju10g0804 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 265 IPR027417 -
Alju10g0804 668 SUPERFAMILY EF-G C-terminal domain-like 365 448 IPR035647 -
Alju10g0804 668 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 95 110 IPR031157 -
Alju10g0804 668 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 58 256 IPR000795 GO:0003924|GO:0005525
Alju10g0804 668 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 56 230 - -
Alju10g0804 668 NCBIfam small GTP-binding protein domain 61 200 IPR005225 GO:0005525
Alju10g0804 668 SUPERFAMILY Translation proteins 205 361 IPR009000 -
Alju10g0804 668 FunFam GTP-binding protein TypA 450 544 - -
Alju10g0804 668 Gene3D Translation factors 257 361 - -
Alju10g0804 668 SMART EFG_C_a 458 545 IPR000640 -
Alju10g0804 668 FunFam GTP-binding protein TypA 368 476 - -
Alju10g0804 668 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 652 - -
Alju10g0804 668 FunFam GTP-binding protein TypA 59 256 - -
Alju10g0804 668 CDD BipA_TypA_C 459 539 IPR035651 -
Alju10g0804 668 CDD TypA_BipA 60 255 IPR047041 -
Alju10g0804 668 Pfam Elongation factor G C-terminus 457 540 IPR000640 -
Alju10g0804 668 NCBIfam translational GTPase TypA/BipA 60 660 IPR006298 GO:0003924|GO:0005525
Alju10g0804 668 SUPERFAMILY EF-G C-terminal domain-like 459 575 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0804 Alju-ChrAlju10 7067386 7076150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0804 59 183 Eukaryotic Initiation Factors Gene Family AT3G22980 41.985 5.70e-25 108