Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju10g0804 | ATGGCGGGACCAATTCTTCGTTCTCTCTGGTCCTCTACCAGAAAATCTTTTTCCTCTTCCCCATCCCTTTTCACCCCATATCATTTATTGCCGCGTACCAACACCGGCTACCGCGCCTTCTCCGCCGCCCCAGCAACCGCCGCCGTGGAACCTAGCAGCGCCCTCAACCCCAGCCGCCTCCGCAACGTCGCCGTGATTGCTCATGTTGACCATGGCAAGACCACCCTCATGGATCGAGTACTTCGTCAGTGTGGCGCCGACATACCCCACGAGCGCGCCATGGATTCCATCAGTCTGGAGCGCGAGCGTGGTATCACGATCGCTTCCAAGGTTACTTCAGTTTCATGGAAGGAAAATGAGCTAAATATGGTTGATACGCCTGGACATGCAGATTTTGGTGGTGAAGTTGAACGAGTTGTTGGTATGGTCGAGGGAGCTGTATTGGTTGTAGATGCTGGTGAAGGCCCACTTGCACAAACAAAATTTGTTTTGGCAAAAGCCTTAAAGTATGGGTTACGACCTCTTCTTCTTTTGAACAAAGTAGACCGACCTTCAGTCTCTGAGGAGAGGTGTAATGAAGTTGAGAGTCTGGTGTTTGATCTTTTTGCCAACCTTGGCGCAACAGAGGAGCAATTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCCACCACCTTTACCAAGGATCCTCCTGCCGAGGCAAAAAATATGTCACAACTTCTTGATGCCATAGTAACTCATGTCCTACCACCAAAAGCAAATATTGATGCGCCTTTCCAAATGCTGGTTTCAATGATGGAACGGGATTTCTATCTTGGGCGAATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTAGGTGACAAGGTTCATGGTCTATCTAACAAAGATTCTGGAGTAGTGAAGATTGATGATGGAAAGGTTGTGAAATTAATGAAAAAGAAGGGGACGAGCATGGTTCCAATTGACTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGGTTGACAAGTCCAATTATAGGAAACACCGTAGCAACTGCAGAGATTATGTCTGCATTACCCACAATTGTGCTGGATCCTCCAACAATTTCCATGACTTTTGGTGTAAATGACTCTCCTTTAGCTGGTCGTGATGGTACTCATTTGACTGGAGGGAGAATTGGTGATCGGCTGATGGCTGAAGCTGAAACGAACATTGCCATAAATGTGCTTCCTGGCTTATCAGAGTCATATGAAGTTCAGGGAAGAGGAGAGCTACAATTGGGCATCCTTATTGAGAATATGAGGCGTGAAGGATTTGAGTTGTCTGTCTCTCCACCTAAAGTCATGTACAAAGCTGAAAGTGGTGAGAAACTTGAGCCAATTGAAGAAGTTACAATTGAAGTCAATGATGAACATGTTGGGTTAGTTATGGAGGCCTTATCTCATAGGCGAGGTGAAGTTATGGACATGGGTCCCGTTGCAGGAACCGTTGGTCGGGCTAGATTGTCTTTGACTTGTCCATCAAGGGGCCTGGTTGGTTATAGGAGTGTGTTTAGCAGCGACACGCGTGGAACTGGCTTCATGCACCGTGCTTTCCTTCAGTATGAAAAATTCCGAGGTCCTCTTGGCAATGTCAGGAAAGGAGTACTGGTATCAATGGGTTATGGTACAATTAGAGCTTATGCATTAATGAGCTTAGAAGCTCGTGGGACTTTATTTGTAACCCCAGGAATGGAGACATACGATGGAATGATTATTGGTGAACACTCACGAGATACAGATCTTGATGTCAATCCAGTGAGAGCTAAGGAACTTACAAATATTCGGGCTGCAGGTAGTGATGAAAATATCAAGCTGTCTCCGCCTCGCCTTATGACCCTGGAAGAAGCTATAGGATATGTAGCTTCCGACGAACTTATCGAGGTTACTCCAAAGGCTATACGGCTGAGAAAGAAATATCTTGATGTTAACAAGCGTAAAAGCATGAGTAAAAAGCCAAAGGAATGA | 2007 | 0.4589 | MAGPILRSLWSSTRKSFSSSPSLFTPYHLLPRTNTGYRAFSAAPATAAVEPSSALNPSRLRNVAVIAHVDHGKTTLMDRVLRQCGADIPHERAMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEAKNMSQLLDAIVTHVLPPKANIDAPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDKVHGLSNKDSGVVKIDDGKVVKLMKKKGTSMVPIDCAGAGDIISMAGLTSPIIGNTVATAEIMSALPTIVLDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNIAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKAESGEKLEPIEEVTIEVNDEHVGLVMEALSHRRGEVMDMGPVAGTVGRARLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLQYEKFRGPLGNVRKGVLVSMGYGTIRAYALMSLEARGTLFVTPGMETYDGMIIGEHSRDTDLDVNPVRAKELTNIRAAGSDENIKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKKPKE | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju10g0804 | 668 | CDD | BipA_III | 367 | 444 | IPR047043 | - | |
Alju10g0804 | 668 | Pfam | Elongation factor Tu domain 2 | 277 | 350 | IPR004161 | GO:0005525 | |
Alju10g0804 | 668 | Gene3D | - | 450 | 544 | - | - | |
Alju10g0804 | 668 | Pfam | Elongation factor Tu GTP binding domain | 59 | 252 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | CDD | BipA_TypA_II | 263 | 360 | IPR047042 | - | |
Alju10g0804 | 668 | Gene3D | bipa protein | 545 | 660 | IPR042116 | - | |
Alju10g0804 | 668 | FunFam | Elongation factor family protein | 257 | 361 | - | - | |
Alju10g0804 | 668 | PRINTS | GTP-binding elongation factor signature | 174 | 183 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | PRINTS | GTP-binding elongation factor signature | 102 | 110 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | PRINTS | GTP-binding elongation factor signature | 122 | 132 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | PRINTS | GTP-binding elongation factor signature | 62 | 75 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | PRINTS | GTP-binding elongation factor signature | 138 | 149 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | Gene3D | - | 58 | 256 | IPR027417 | - | |
Alju10g0804 | 668 | FunFam | GTP-binding protein TypA | 545 | 631 | - | - | |
Alju10g0804 | 668 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 55 | 265 | IPR027417 | - | |
Alju10g0804 | 668 | SUPERFAMILY | EF-G C-terminal domain-like | 365 | 448 | IPR035647 | - | |
Alju10g0804 | 668 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 95 | 110 | IPR031157 | - | |
Alju10g0804 | 668 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 58 | 256 | IPR000795 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 56 | 230 | - | - | |
Alju10g0804 | 668 | NCBIfam | small GTP-binding protein domain | 61 | 200 | IPR005225 | GO:0005525 | |
Alju10g0804 | 668 | SUPERFAMILY | Translation proteins | 205 | 361 | IPR009000 | - | |
Alju10g0804 | 668 | FunFam | GTP-binding protein TypA | 450 | 544 | - | - | |
Alju10g0804 | 668 | Gene3D | Translation factors | 257 | 361 | - | - | |
Alju10g0804 | 668 | SMART | EFG_C_a | 458 | 545 | IPR000640 | - | |
Alju10g0804 | 668 | FunFam | GTP-binding protein TypA | 368 | 476 | - | - | |
Alju10g0804 | 668 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 368 | 652 | - | - | |
Alju10g0804 | 668 | FunFam | GTP-binding protein TypA | 59 | 256 | - | - | |
Alju10g0804 | 668 | CDD | BipA_TypA_C | 459 | 539 | IPR035651 | - | |
Alju10g0804 | 668 | CDD | TypA_BipA | 60 | 255 | IPR047041 | - | |
Alju10g0804 | 668 | Pfam | Elongation factor G C-terminus | 457 | 540 | IPR000640 | - | |
Alju10g0804 | 668 | NCBIfam | translational GTPase TypA/BipA | 60 | 660 | IPR006298 | GO:0003924|GO:0005525 | |
Alju10g0804 | 668 | SUPERFAMILY | EF-G C-terminal domain-like | 459 | 575 | IPR035647 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju10g0804 | Alju-ChrAlju10 | 7067386 | 7076150 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju10g0804 | 59 | 183 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 41.985 | 5.70e-25 | 108 |