Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0779 ATGCTCTTAGAGAAGAAGATGGACGACGGAGAAATCTCAAATATCAGTTTTCCTCAAAACCACCCACCAACCGCCGCATCATCAAACAATACCAATCCTCCTCCGATTCTCAAGAGAAAGAGAAACCTCCCAGGAAACCCTGATCCTGAAGCGGAAGTGATAGCATTATCGCCGAAGACTTTAATGGCGACGAACAGATTTCTGTGTGAGATTTGTGGGAAAGGGTTTCAGAGGGATCAAAATCTGCAACTTCATAGACGAGGACACAATCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAAGTGAAAAAGAGAGTGTATGTGTGTCCAGAAAAAAGCTGCGTTCACAATCACCCATCGAGGGCTCTGGGAGATTTGACTGGCATCAAAAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAGTGTGAGAAATGCTCAAAGCGTTACGCTGTTCAGTCTGATTGGAAAGCACACTCCAAAACGTGCGGTACTAGGGAATACAAATGTGACTGCGGCACCATCTTTTCACGGAGGGATAGCTTCATAACACATAGGGCCTTCTGTGATGCCCTAGCAGAAGAGACAGCAAGAGTGAACGCAGCATCAAACATTAGCAACAACATAAGTTACAATAATATAATTGGAGCTGCTACTTCACTAGGACCAAACAACAACAACAATAATATGGCAGCCCATTTTCCTTCAATCTTCAAGCCAATTTCAAACACCAATTCAGAGGAAGCAAATAATAATAACCAAACACCTCTTAGAGGACTATCCCTATGGATGGGTCATCATCATCACCAACAACCTGATCATCAAACAATAATGCCTAGTGACCACCATGGCCAGTTTGTTTCACAATCGCAGCAGTTAAATTGGGTGTTTGGGAACAAGCTTATTACAAGTTCTAATTCTTCTTCCTCTTGTCAAGAGCTAGCAAACACTTCAATTGGAATGATAAGTGTTCCTTCCTTGTATAGCTCCCAACAACATCATCATCATCAAACATACCAAACATCATCGTTGGCAAACATGTCGGCGACGGCGCTGTTGCAAAAAGCTGCTCAGATAGGAGCAACCTCGACCACATGTGACCCCATATTTCTGGGGAGCTTAGGTTTGAAATGTAGCAGTCAAGGTGGTCATCAAGAAGAAGATGATCATGGGAGTAGCAAGTATAATTATGGGATGTTCGGTTCGGGTTCGGGTTCGGTTCTCACCAATGTTCGTGGTGGTGGAGGTGGTGGAGGAAGTGATCAGACGACAGAGAACAACAACAACAACAACCCAGCAAGTGAAATGACACCAATGCACCCAGCAAAACGCCCAAGGCAGGTATTACAACAACAGAATGAGGAAGGAGGGCAAACTAGGGATTTCCTTGGTGTTGGTGGTAGTGTGCAAACCATTTGCCACCCTTCATCAATACATGGATGGGTCTGA 1455 0.4447 MLLEKKMDDGEISNISFPQNHPPTAASSNNTNPPPILKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVKKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASNISNNISYNNIIGAATSLGPNNNNNNMAAHFPSIFKPISNTNSEEANNNNQTPLRGLSLWMGHHHHQQPDHQTIMPSDHHGQFVSQSQQLNWVFGNKLITSSNSSSSCQELANTSIGMISVPSLYSSQQHHHHQTYQTSSLANMSATALLQKAAQIGATSTTCDPIFLGSLGLKCSSQGGHQEEDDHGSSKYNYGMFGSGSGSVLTNVRGGGGGGGSDQTTENNNNNNPASEMTPMHPAKRPRQVLQQQNEEGGQTRDFLGVGGSVQTICHPSSIHGWV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0779 484 SMART c2h2final6 143 163 IPR013087 -
Alju10g0779 484 SMART c2h2final6 67 89 IPR013087 -
Alju10g0779 484 SMART c2h2final6 108 138 IPR013087 -
Alju10g0779 484 MobiDBLite consensus disorder prediction 1 49 - -
Alju10g0779 484 Gene3D Classic Zinc Finger 63 90 - -
Alju10g0779 484 SUPERFAMILY beta-beta-alpha zinc fingers 66 163 IPR036236 -
Alju10g0779 484 MobiDBLite consensus disorder prediction 408 461 - -
Alju10g0779 484 FunFam protein indeterminate-domain 5, chloroplastic-like 121 200 - -
Alju10g0779 484 Gene3D Classic Zinc Finger 100 191 - -
Alju10g0779 484 MobiDBLite consensus disorder prediction 418 438 - -
Alju10g0779 484 MobiDBLite consensus disorder prediction 13 36 - -
Alju10g0779 484 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Alju10g0779 484 FunFam protein indeterminate-domain 12-like 46 114 - -
Alju10g0779 484 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Alju10g0779 484 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 472 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0779 Alju-ChrAlju10 6676754 6679057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0779 34 484 IDZ Gene Family AT1G03840 53.737 2.25e-150 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju10g0779 None None None