Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0777 ATGGCAACTCCTGCTGCCGTCTATTTCCATTATATAATGTATAAAATAAAATTGGTTCGGTTGCTCTCCCTTTCGATTCTTCTACTTAATATTCCGCAGACAATAGGGTATGAAGCAGGGGCGAAGTCAGACACACACAATAATATGAGTATGGTTGACAGAACTTGTCCTTCGTGTGGCCATCACATCAAAGACCACCAGGGAGGGACAATTATAAAAGAGTTGCCAGGACTACCAGAGGGAGTGAAGTTTGATCCGAGTGATCAGGAGCTTTTACAACACTTGAAAGCGAAGGTGGGGTCTGATATTCAAAAGCTTCATCCTCTCATCGATGACTTCATTCCCACCCTTGAATCCCAAAATGGAATCTGCTCTACTCATCCCCACAAACTCCCAGGAGTTAGGAAAGATGGCCTAATACGCCATTTCTTTCACGGGCCATCAAAAGCATACACAACAGGGACAAGAAAAAGGAGAAAGGTAATAAACTCAGAAGAAACAGAAGGAGGGAGTGAGACAAGGTGGCACAAAACAGGAAAGACAAGGCCAGTGTTCATAAATGGAAAGTTGAAAGGCTACAAGAAGATCCTCGTACTTTATGCCAACTATGGCAGACAGAGGAAGCCTGAGAAGACAAACTGGGTGATGCATCAGTACCACCTCGGATCCCACCAAGAGGAGAAGGAAGGCGAGCTCGTCGTCTCCAAGGTTTTCTATCAGACACAGCCCAGACATTGTGGTTCTTCACTTCTCAAAACTCATCATCTTCATTTTCATGATAATCACAACAACAATAATAATGGGTTCCTTCAGCTCTAG 819 0.4396 MATPAAVYFHYIMYKIKLVRLLSLSILLLNIPQTIGYEAGAKSDTHNNMSMVDRTCPSCGHHIKDHQGGTIIKELPGLPEGVKFDPSDQELLQHLKAKVGSDIQKLHPLIDDFIPTLESQNGICSTHPHKLPGVRKDGLIRHFFHGPSKAYTTGTRKRRKVINSEETEGGSETRWHKTGKTRPVFINGKLKGYKKILVLYANYGRQRKPEKTNWVMHQYHLGSHQEEKEGELVVSKVFYQTQPRHCGSSLLKTHHLHFHDNHNNNNNGFLQL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0777 272 ProSiteProfiles NAC domain profile. 78 240 IPR003441 GO:0003677|GO:0006355
Alju10g0777 272 FunFam NAC domain-containing protein 73 87 244 - -
Alju10g0777 272 SUPERFAMILY NAC domain 71 240 IPR036093 GO:0003677|GO:0006355
Alju10g0777 272 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 42 252 IPR044799 GO:0003700
Alju10g0777 272 Pfam No apical meristem (NAM) protein 79 221 IPR003441 GO:0003677|GO:0006355
Alju10g0777 272 MobiDBLite consensus disorder prediction 154 176 - -
Alju10g0777 272 Gene3D NAC domain 87 244 IPR036093 GO:0003677|GO:0006355
Alju10g0777 272 MobiDBLite consensus disorder prediction 158 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0777 Alju-ChrAlju10 6661549 6669195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0777 54 250 NAC Transcription Factor Family AT4G28500 71.066 7.16e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g0777 NAM 5.2e-21 No_clan