Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0774 ATGGAGGCCTGTTCAGAAGGAGAGAAGCAAAAGCCACATGAGGGGGAGAATAAAACCAAGCGCAAAATGAAGACTGCTTTCCAGTTGGAGATTCTGGAGAAAACTTATGCTACCGAACCGTATCCATCCGAGGCATTGCGAACAGAGCTATCAGCGAAATTGTGTCTTTCAGATCGTCAACTGCAGATGTGGTTTTGTCACCGCCGGTTGAAAGACAGAAAGACACCAGCAGCGAAGAAGCCGGGAAATGAATCGCCACCTGGAGCTGTGACTCTGACTCCGGCGCCAGTGGCTGATGGTTCTGAGCAGAAGCTTATGGGTGATGGTGGACATGCGCGTGATTCCATTTCTGGGAAGAGGCTATACAGTCATATGGATCCACGACGACCTGGTATGGCCTTTCCTAGTATTGGAGGGGGATTGCCGGCAATGGAGAGTTACTATGAATCACATCAGTCCAAAGCTGAGCTGAAAGCAATTGCATTTGTGGAAGCACAGTTAGGGGAGCCATTAAGAGAGGACGGGCCAATTCTGGGGATGGAATTTGATCCATTGCCACCTGGTGCTTTTGGTGCACCAATAGGGCCTACTGCGATGGGGCAGCATAGACAATCTGGAAGGCCTTTTGAGGCTAAAATTTATGAACGAGTGGACAAGGGTGCTTCAAGGACTCTCCATGAATATAAATTTATTCCAGAGCAGCCAACTGTTAGAAATGAGGCATATGACTATGAGAGAGTCACTCCTAAACAATATGGTTCTCTTGATGGAACTCCACATGCAAGGACTTTATTGTCTAGTGGGCGACAATTCCTTCATGGGAATGAAATTGCTTCCTATGGGTATGGATATCAGAATCCGATGCCAGGGTTAAATCTTTTGTCTCAGCAAGGCAGGCAGAATCATCTTTTACCTTCTGCTTCTAGACTGAATGATAATGTTCCATGGAAAAACACGTTTGTGGATGTGCTTGCTGACTCTCATGTTGGAGCTTACCCTGCAGCTCAGATTGACAGCATGTTAACTCCATTTGACCAGAAGGTTATCCATGAGGAGCAAATTTCACAGTTTCAGAAGAAGCGGAAGAATGAAGAGGCTAGATTGCAGCGGGAACTTGAGGCACAAGAGAAACGAATCAGAAAAGAGCTTGAAAAGCAGGATATTTTAAGGCGAAAGAGAGAAGAGCAAGTAAGGAAAGAGATGGAGAGGCATGAACGTGAAAGGCGGAAGGAAGAGGAAAGGATATTGCGTGAAAGACAGCGGGAAGAGGAGAGATACCAAAAAGAACAGAGGCGTGAACTTGTGCGGAGGGAGAAGATTTTGCAGAAAGAGTCAATCAGAGCTGAGAAAATGAAACAGAAGGAAGAACTACGCAAAGAGAAAGAGGCAGCAAGGATCAGAGCAGCCAATGAGAGAGCTATTGCTCGCAAAATGGTAAAAGAATCAATGGAACTTATTGAAGATGAACGACTGGAATTGATGGAGTTAGCGGCATCTGAAAAGGGACTTTCTTCTATTTTGTCACTTGACTATGAAACTTTACAGAATCTTGAGTTATTTAAAGATGGGCGGGCTTCATTTCCACCAAAGACTGTACTGCTGAAAAGGCCTTTCTCAATTCAACCTTGGTTGGATTCTGAGGAGAACGTCGGAAACCTTTTGATGGTTTGGAGGTTTTTGATCTCCTTTGCTGATGTTCTTGGGATTTGGCCATTCACCTTGGATGAATTTTTACAAGCTTTCCATGACCATGATCCTAGGTTGTTAGGCGAGATTCATATTGCTCTTTTCAGATCTATTATAAAAGATATTGAAGATGTTGCAAGAACTACTGGGGTAGGAGCTAATTATAACAGTGCTGTCAACCCTTGTGGGGGTCATCCACAAGTAGTTGAAGGGGCATATGTGTGGGGGTTTGATATAAGAAATTGGGAGCGACTCTTAAATCCCTTGACGTGGCCAGAAATTATGCGGCAATTTGCTTTATCAGCTGGATTTGGACCACAATTAAAAAAAAGAATCATTGAGCCAGTGTATCCTCGTGATAACAGTCAGGGTATTGATGATGAAGATGTTATTTCCAATCTACGAAGTGGGGCGGCTGTTGAAAATGCTGTTGCTATCATGCAAGAAAAGGGTTTATCTAACCCAAGAAGATCTAGGCATCGTTTGACACCAGGAACTGTCAAGTTTGCAGCATTTCATGTCTTATCTCTTGAAGGAAGCAAGGGCCTCAACATATTGGAAACTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACGACAAGCAAAACTCCAGAGGCTTCTATCGCTGCTGCTTTGTCCAGAGACACAAAGCTTTTTGAAAGAACAGCTCCTTCGACATATTGTGTACGTCCTGCATATAGAAAGGACCCGGCTGATGGCGAGGCAATCCTCTCAGCTGCTAGAGAAAGAATCAGGATATTCAAAAATGGACTTGTCAATGCAGAAGAACCAGATGATGGTGAAAGGGATGATGATTCGGAAATTGATATGGCAGAAGATCCTGTGGCTGATGATTTAGTAAATGAAACAAATAAAAAGGAGGCTTCTGATTTTGTGGAATCTAGTTTGAACACTGTGGTCAAGAATAGAGAAGGCAGTAGTGAAATTTTGCAAACCCAAGTGAATGAGGGTGTAGCATCAATTGTTGCTGAAGAATTTAATCAGGAGATTGCTGGTAGTAGCAATGTTGTAACTAAACCTGATCTGGAAGACACCATTATTGATGAAAATAATCCCGGTGAACCATGGGTTGAGGGGCTTATTGAAGGAGAATATTCAAATCTTAGTGTAGAAGAGCGACTTAACGCCCTTGTTGCTCTGATTGGTGTGGCAATTGAAGGAAATTCAATTCGTTTTGTTCTTGAGGAGCGTCTAGAAGCGGGAAATGCTTTAAGAAAGCAGATGTGGACAGAGTTGCAGCTTGATAGACACCGAATCAAAGAGGATTGCTTTTTTAAGGTGCAGTCTGCCCCTTGTGTGGGCAATAAGAATGAACCAACTCCTTCAATGTCATCCATGGAGGGTAAAAAGAGCCCTTTGCTTAGTGTTGATGACAGGATTGAAAAAACACTACCAACTCCCCCTGCCCAGCAAGTACATTTAAATGATCTACTGGGCAATACTGTTCCATCAGAAGTGAACGTAAAAATGCAAGACTATGTTGCCCCTGATAGTTATTCTTACCAACAATTTGGATCTGGTGCTGAAAAATCAAAATCAAATTTCAAGGCATACATTGGTCAATTAGCAGAAGAAACTTATATTTATCGGTCATTGCCTCTTGGTTTGGATCGGAGACGTAATCGATATTGGCAGTTCACTACATGTACTTCTCAGAATGATCCAGGCTGTGGTAGGGTTTTTGTGGAGATGCACGATGGTTGTTGGAGGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTCTTGGCATCATTGGATGTACGTGGGATTAGGGAATCCCATTTGCACATGATGTTGCGACGAGTCGAAATGTCCTTCATGGAATCTGTTAGAAGGAATAAGTTGAGAAGACAAGATGGAGACACTCTTAAAACAGAAGCTTTTCAAATGGCTACCGAACATGGTTGCTGTGCTTCCATGTGCGGTACTAATTCAGATGTGTCGGAGACATCAACATCTTTTGTGATTCAGATGGGAAGGAATGATTCTGATAACCAAGATGCTTTGAGGAGGTACCAGGATTTTGAAAAGTGGATGCTGATGGAAGGCCTGGATTCCTCAGTATTACATGGATTGAGGGCTGGGAAGAGAAGGGGCAGTCAATTGTTGGGCATGTGTGATTACTGCCATGGGATTTATTTATCTGAAGAAATTCCATCTCCTCCCTGCTGTAGAACCCTTCGTACTTGTAAGAGCAACTTAAGCTCTTCTGAACATATGGCTCAATGTGAAGGAAAAGTGAAGATTACCAGTGATTATACATTTAGTGTCTCCCCCTCTTCTCCATTAAGAATGAGATTGCTTAAAGTGCTGTTGTCAATAGTTGAGGTTTCCATTCCGGAAGAAGCTCTTGAACCTATCTGGACAGACAGCTATCGGAAGTCTTGGACTATCAAGCTGCTTGCTTCTTCTTCCTCTGAAGAACTTCTTGAGATATTGACTATACTGGAGGGTGCTATCAAGAGGGATTATTTGGCTTCAAACTTCAAGACTACCAGTGAGCTGTTGGGTTCTATTTTTTCTTCTGGATTTCATGGTGATTCCATGGGAGCTGAAAGAACTCCTGTACTGCCATGGGTGCCTCATACAACAGCTGCTGTGGCGCTAAGGCTCATGGAACTTGACATCTCAATCTTTTATACCTTGGAGCAGAAGCTGGAGTCTGAAAAGGACAAGACAACTGATAATGTTGTGAAGTTTCCTTCAAACTATGCTTCTGCCAAAATTGCTCAAGTTGCTGCTGGTACAGCTGAGACTTCACGTTTGGCTGGGCATAACATGATTGATCTGGGTGCTGGATTTGCTAGCTACAGTCGAGGACAAAGGTCCCATGGACAGGGCCGAGGTCGCTCCCATGGTGGGGAATCACGAGGAAGGATCATCAGTTCAAGATCTGAATCTAGAAAGAAAGTTACTACCACTAGCGGCAGGAGACTTGGACAGGGACTAAGATGGAAGGGGAAATCACGAGCTCGCAGTGGGCAGCGTCGCTCCCGTCTAAGCATCAGAAGTGGGAGGAAGAAACCAGCAGCTAAAGAGCGTGAGATTACTGTTGTGAGGGGTGCTCCCAAAGAGGAATCAGCTGGTGTTTTTGTCAGGGAGGCTAGCAATGTAGCTGAAACCATTGGTTGTCAAATGGAGACTCCTGAAAATGCTGCTAGCAGTTCTGGGAGATCAGGTTACGAGGAAGATAAATATCAAGTAACAGGTGACGAGAATGCTTATCTAATGGATAATAATGATGATGGCTATGATAGGTGTGGATTTAGTGGGAAGTCTGAGAATATGGTAGAAGGTATTAGTTTTAGTTTAGATGATGACGAAGATGTGGGTGGATTTAGTGAGAAGTCTAACAATTTAATTGAAGGGATTGATTTTAATATAGATGACGACGAAGAAGAGGATATTGATGAGGACGAGGATGATGAGCAGGTCGGTGTTGATGTCGAAGGTTTCATAAATGGGGATTCAGACATAGAAGAGAACGGGGAAGATGCAGAACAAAGCTTGGATCCAGATGGATTGATCTCTTCATCCTCAGAGTACGGCGGCTAA 5268 0.4358 MEACSEGEKQKPHEGENKTKRKMKTAFQLEILEKTYATEPYPSEALRTELSAKLCLSDRQLQMWFCHRRLKDRKTPAAKKPGNESPPGAVTLTPAPVADGSEQKLMGDGGHARDSISGKRLYSHMDPRRPGMAFPSIGGGLPAMESYYESHQSKAELKAIAFVEAQLGEPLREDGPILGMEFDPLPPGAFGAPIGPTAMGQHRQSGRPFEAKIYERVDKGASRTLHEYKFIPEQPTVRNEAYDYERVTPKQYGSLDGTPHARTLLSSGRQFLHGNEIASYGYGYQNPMPGLNLLSQQGRQNHLLPSASRLNDNVPWKNTFVDVLADSHVGAYPAAQIDSMLTPFDQKVIHEEQISQFQKKRKNEEARLQRELEAQEKRIRKELEKQDILRRKREEQVRKEMERHERERRKEEERILRERQREEERYQKEQRRELVRREKILQKESIRAEKMKQKEELRKEKEAARIRAANERAIARKMVKESMELIEDERLELMELAASEKGLSSILSLDYETLQNLELFKDGRASFPPKTVLLKRPFSIQPWLDSEENVGNLLMVWRFLISFADVLGIWPFTLDEFLQAFHDHDPRLLGEIHIALFRSIIKDIEDVARTTGVGANYNSAVNPCGGHPQVVEGAYVWGFDIRNWERLLNPLTWPEIMRQFALSAGFGPQLKKRIIEPVYPRDNSQGIDDEDVISNLRSGAAVENAVAIMQEKGLSNPRRSRHRLTPGTVKFAAFHVLSLEGSKGLNILETADKIQKSGLRDLTTSKTPEASIAAALSRDTKLFERTAPSTYCVRPAYRKDPADGEAILSAARERIRIFKNGLVNAEEPDDGERDDDSEIDMAEDPVADDLVNETNKKEASDFVESSLNTVVKNREGSSEILQTQVNEGVASIVAEEFNQEIAGSSNVVTKPDLEDTIIDENNPGEPWVEGLIEGEYSNLSVEERLNALVALIGVAIEGNSIRFVLEERLEAGNALRKQMWTELQLDRHRIKEDCFFKVQSAPCVGNKNEPTPSMSSMEGKKSPLLSVDDRIEKTLPTPPAQQVHLNDLLGNTVPSEVNVKMQDYVAPDSYSYQQFGSGAEKSKSNFKAYIGQLAEETYIYRSLPLGLDRRRNRYWQFTTCTSQNDPGCGRVFVEMHDGCWRLIDSEEGFDALLASLDVRGIRESHLHMMLRRVEMSFMESVRRNKLRRQDGDTLKTEAFQMATEHGCCASMCGTNSDVSETSTSFVIQMGRNDSDNQDALRRYQDFEKWMLMEGLDSSVLHGLRAGKRRGSQLLGMCDYCHGIYLSEEIPSPPCCRTLRTCKSNLSSSEHMAQCEGKVKITSDYTFSVSPSSPLRMRLLKVLLSIVEVSIPEEALEPIWTDSYRKSWTIKLLASSSSEELLEILTILEGAIKRDYLASNFKTTSELLGSIFSSGFHGDSMGAERTPVLPWVPHTTAAVALRLMELDISIFYTLEQKLESEKDKTTDNVVKFPSNYASAKIAQVAAGTAETSRLAGHNMIDLGAGFASYSRGQRSHGQGRGRSHGGESRGRIISSRSESRKKVTTTSGRRLGQGLRWKGKSRARSGQRRSRLSIRSGRKKPAAKEREITVVRGAPKEESAGVFVREASNVAETIGCQMETPENAASSSGRSGYEEDKYQVTGDENAYLMDNNDDGYDRCGFSGKSENMVEGISFSLDDDEDVGGFSEKSNNLIEGIDFNIDDDEEEDIDEDEDDEQVGVDVEGFINGDSDIEENGEDAEQSLDPDGLISSSSEYGG 1755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0774 1755 MobiDBLite consensus disorder prediction 73 94 - -
Alju10g0774 1755 CDD homeodomain 18 75 IPR001356 GO:0003677
Alju10g0774 1755 Pfam HB1, ASXL, restriction endonuclease HTH domain 727 794 IPR007759 GO:0006355
Alju10g0774 1755 Pfam Homeodomain 18 74 IPR001356 GO:0003677
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1 22 - -
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1519 1544 - -
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1554 1576 - -
Alju10g0774 1755 SMART HOX_1 17 79 IPR001356 GO:0003677
Alju10g0774 1755 SUPERFAMILY Homeodomain-like 13 74 IPR009057 -
Alju10g0774 1755 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 924 962 IPR028942 -
Alju10g0774 1755 Pfam DDT domain 548 603 IPR018501 -
Alju10g0774 1755 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 1753 IPR044977 GO:0006357
Alju10g0774 1755 Gene3D - 2 77 - -
Alju10g0774 1755 Coils Coil 347 392 - -
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1725 1739 - -
Alju10g0774 1755 Coils Coil 394 432 - -
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1509 1588 - -
Alju10g0774 1755 Coils Coil 440 474 - -
Alju10g0774 1755 MobiDBLite consensus disorder prediction 1724 1755 - -
Alju10g0774 1755 SMART testlast3 547 606 IPR018501 -
Alju10g0774 1755 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1101 1172 IPR028941 -
Alju10g0774 1755 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Alju10g0774 1755 ProSiteProfiles HARE-type HTH domain profile. 727 796 IPR007759 GO:0006355
Alju10g0774 1755 ProSiteProfiles 'Homeobox' domain profile. 15 75 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0774 Alju-ChrAlju10 6625074 6635797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0774 1 1474 Homeobox Transcription Factor Family AT5G44180 50.695 0.0 1346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Alju10g0774 WSD 5.4e-13 No_clan