Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0773 ATGGGTGTGGACTATTACAAGATCTTGCAGGTTGACAAGAATGCCAAAGACGACGACTTGAAGAAGGCTTACAGGAAGCTTGCGATGAAATGGCATCCTGATAAGAACCCCAATAACAAGAAAGAAGCTGAAGCTAAATTCAAGCAAATTTCTGAAGCCTACGATGTTCTGAGTGATCCTCAAAAGAGAGCCATCTATGATCAGTATGGTGAAGAGGGTCTGAAGGGTGGGGTTCCGCCTCCCGATGCCGGAGGGGCTTCTTTCTTTTCAACGGGAGAAGGACCGACGTCGTTTAGGTTCAATCCTAGAAACGCCGACGACATTTTTGCAGAATTTTTTGGGTATTCGAGCCCATTTGGAGGTAGTGGTGGCTATGGAGGAATGAGGTCGAGGTTCTCTAGTGGGATTTTTGGCGATGATATGTTTGGATCATTTGGAGATGCAAGAGGGGGAGTACATATGAGTCCAGGTGGTCCTCGAAAAGCTCCTCCTATTGAGAACAGATTGCCCTGTAGTCTCGAAGACTTGTATCAGGGAACTACAAAGAAGATGAAGATCTCCAGAGAAATCGCTGATGCTAGTGGCAAAACCATGCCAGTAGAGGAGATCCTAACTATCAACATCAAGCCTGGTTGGAAGAAGGGTACGAAGATAACCTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTGACGCCGGCAGACCTTGTTTTCATCATCGATGAAAAGCCTCACGGTGTTTTCACTCGCGATGGAAATGATCTGGTTGTGACACAAAAGATCTCTCTGGCGGAGGCCTTGACCGGTTATACAGTACAGCTGACTACCTTGGATGGAAGGAACCTGACCATACCAATCACCAATGTGATTCATCCAACCTACGAGGAGGTTGTTCCAAGAGAAGGAATGCCACTCCAAAAGGATCCCACAAAGAAGGGAAACTTGAGGATTAAGTTCAACATTAAGTTCCCCACTCGGCTGACATCGGAGCAGAAGGCCGGAATCAGGAAACTCCTCGGTGTCTCACCCTGA 1029 0.4713 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAIYDQYGEEGLKGGVPPPDAGGASFFSTGEGPTSFRFNPRNADDIFAEFFGYSSPFGGSGGYGGMRSRFSSGIFGDDMFGSFGDARGGVHMSPGGPRKAPPIENRLPCSLEDLYQGTTKKMKISREIADASGKTMPVEEILTINIKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHGVFTRDGNDLVVTQKISLAEALTGYTVQLTTLDGRNLTIPITNVIHPTYEEVVPREGMPLQKDPTKKGNLRIKFNIKFPTRLTSEQKAGIRKLLGVSP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0773 342 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Alju10g0773 342 CDD DnaJ_C 163 326 - -
Alju10g0773 342 CDD DnaJ 4 59 IPR001623 -
Alju10g0773 342 Gene3D DnaJ domain 3 123 IPR036869 -
Alju10g0773 342 Gene3D - 164 242 - -
Alju10g0773 342 SMART dnaj_3 3 62 IPR001623 -
Alju10g0773 342 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Alju10g0773 342 FunFam Dnaj homolog subfamily b member 161 242 - -
Alju10g0773 342 FunFam DnaJ subfamily B member 13 244 324 - -
Alju10g0773 342 FunFam DnaJ subfamily B member 13 3 123 - -
Alju10g0773 342 Gene3D - 244 324 - -
Alju10g0773 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 244 IPR008971 GO:0006457|GO:0051082
Alju10g0773 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Alju10g0773 342 Pfam DnaJ domain 4 67 IPR001623 -
Alju10g0773 342 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Alju10g0773 342 PRINTS DnaJ domain signature 62 81 IPR001623 -
Alju10g0773 342 PRINTS DnaJ domain signature 24 39 IPR001623 -
Alju10g0773 342 PRINTS DnaJ domain signature 42 62 IPR001623 -
Alju10g0773 342 PRINTS DnaJ domain signature 6 24 IPR001623 -
Alju10g0773 342 Pfam DnaJ C terminal domain 165 323 IPR002939 -
Alju10g0773 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0773 Alju-ChrAlju10 6619546 6621562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0773 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 5.62e-10 58.5