Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0771 ATGCTTGCGGTGTCACCTTTAAGGGGAACCCAAGATGAGATCAAAAGCCAGCGAGAGATGGGTGGTTTCTCATCTATCGTGGGAGAAGATGAACAGTTTGGAGAATTTTCCGACGGGAGTTTATTGGAAAGCATTAATTTTGATGATCTTTTTGTCGGTATCAACGTCGGCGCCGGAGATGAGCTGCTGGATTTCGAGATGGGCCTGGAAATCCTCTCCGAGTTCTCCATGGAGTCGTCGGAGAACATGAACTGCTCGCCCTCTCTTTCATTGGAACATAATAATGATAATGGAGCTGATCAACATCAGAACAGTATTATAAATGGGAAGGAGGAGGATGAAGAAGAAGATTGTAATAATAAAGTTTCGTCAGCTTCAGCTTCAAATTCTGGGTCAAGTAGGGCAGAAGAAGAGATAATGAACAAAAGAGAGGAACCTGCGACTGCGACGTCGTTGAAGTCATCGCCGGCGACTACGAAGGAAGGTGAGCAAAAGGGAAGAAAATCTTCAGGCCAAACAAAAAATTCGCAAGGGAAGAGAAAGGTGAAGGTGGATTGGACGCCAGAATTACACAGACAATTCGTGCAGGCAGTGGAGCAACTTGGAGTGGACAAGGCAGTTCCTTCCAAAATCTTAGAGATTATGGGAATTGCTTGTCTGACTCGCCACAACATCGCTAGCCACCTCCAGAAATATCGATCGCATAGGAAGCATTTACTGGCGCGTGAAGCTGAAGCTGCGAGGTGGAATAAGAGGAGAGAGGTAAGGCCATGGGCGGCGGCGCCACCCACCGTGGGTTTTCCTCATGTGGCTCCTCCTCCGTCGCCGTCCACGATGCCGCCCCAATATTTTAGACCCTTTCATGTATGGGGCCATCCCACGATGGACCACTACTCCTTCATGGCCCGCTGGCCGCCGCCCCCGGCCTGGCCATGCCCAACCGCTCCTCCACCGCCACCTCCGGGCCCTTCATTCTGGCACCATCACCACCACCACCACCAGCAGGCTGATCCCAAAGCACTAACCCCAGGAATAGGAACATGTTGTTTTCCACCACCAACATCTCTGACTACGACGGGGTTTGGATCTCCAGCTGTCCCTGGCATCCCACCCCACGGCATGTTCACGGCGGATCCTGACGTCGGATCTCCCACCGGGCAACCCGCCCGTCCATGGCCCGGCTTTGACTTCCTCCCGTCAAAGGAAAGCATAGATGAAGCTCTTGGAGATGTTATGTCAAAACCATGGCTTCCACTCCCTCTAGGGCTTAAAGCCCCGGCGCTTGATAGTGTGTTGAGCGAATTACAGAGACAAGGAATTCCCAAGATTCCTCCCTCTTGTGCTTGA 1347 0.5174 MLAVSPLRGTQDEIKSQREMGGFSSIVGEDEQFGEFSDGSLLESINFDDLFVGINVGAGDELLDFEMGLEILSEFSMESSENMNCSPSLSLEHNNDNGADQHQNSIINGKEEDEEEDCNNKVSSASASNSGSSRAEEEIMNKREEPATATSLKSSPATTKEGEQKGRKSSGQTKNSQGKRKVKVDWTPELHRQFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWNKRREVRPWAAAPPTVGFPHVAPPPSPSTMPPQYFRPFHVWGHPTMDHYSFMARWPPPPAWPCPTAPPPPPPGPSFWHHHHHHHQQADPKALTPGIGTCCFPPPTSLTTTGFGSPAVPGIPPHGMFTADPDVGSPTGQPARPWPGFDFLPSKESIDEALGDVMSKPWLPLPLGLKAPALDSVLSELQRQGIPKIPPSCA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0771 448 MobiDBLite consensus disorder prediction 80 183 - -
Alju10g0771 448 SUPERFAMILY Homeodomain-like 179 238 IPR009057 -
Alju10g0771 448 Pfam Myb-like DNA-binding domain 184 233 IPR001005 -
Alju10g0771 448 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 447 IPR044825 GO:0003700|GO:0045893
Alju10g0771 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 178 237 IPR017930 -
Alju10g0771 448 MobiDBLite consensus disorder prediction 121 135 - -
Alju10g0771 448 FunFam Two-component response regulator 177 240 - -
Alju10g0771 448 Gene3D - 178 239 - -
Alju10g0771 448 MobiDBLite consensus disorder prediction 80 105 - -
Alju10g0771 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 181 235 IPR006447 GO:0003677
Alju10g0771 448 MobiDBLite consensus disorder prediction 106 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0771 Alju-ChrAlju10 6599678 6605027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0771 1 294 G2-like Transcription Factor Family AT5G44190 40.379 4.75e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju10g0771 Myb_DNA-binding 5.7e-08 CL0123