Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0744 ATGGTTTGCCTGAGACTTGACATGGTTGCCAGTAGAAGATTGGGTTCCTGGTTGAGTAAGAGAAGGGGATTAGGGTTTCTATTGCAGGTTACGTTTTGGTGGTGGGCTATTCTGTTGTTTATTCGTCCCGTGGCGGGTCTGAGACCGCTAAGGGAGAGAACTCGGTCGTGGGGCGATGAGTGGTTAATCACAAGAAAAGTGGAAAGTGAGCTAGGTCCATTTTCACAATGGAACATAACAGGAACATACAAAGGAACATGGAAATTTTTAGATACCACCAATGGCTCTTCCAGATTTCCTGACATCAGAAAAACAAATGGCAATACTGTAATTGAATTAATTAGTACACCCACAAAAATAAATGGTGTGCATTATGTGCAGGGAGTAGTTATATTTCATGATGTGTTTGACAATGAGTACAATGTTGGTGGTGCTCAAATCAGAGTAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAGCAGTGGAAAAGAGGGAGAGTTAAGTCAGGGTGAAGATAATATTTTATCTAATCCATATCATCTGCTTGGAGTCTTCTCATCCCAAGTATTCCAAGAATCTTCACGAGATAAGATGTGGAGAAGAAAGCATTCTCCAATATATGACGTGGAGAAACGTTGCAATTTTGAAATTGCTGCACAAATTTCACGACTGTCATCATCGAAAAATGATGGGGATCAGGACCTTTTCCGTCTTGAAGGGCTAACTGAGAGTCCCTCAACCGATGATGATGGGGACTGCTTCTCACCTTTACTACTAAATGCAACTTCAGTTAACATTGAGGTCTACTATAACAAAGCAGTGAACTACACATTGATGGTTACCTTTGTGTCTTTCTTGCAAGTTCTCTTATTGATTCGACAAATGGAGCATAGCAACACTCAATCTGGAGCTGCCAAGGTTTCAATTTTTATGATTGGTCAACAGGCAATCATGGATGCTTATCTTTGCCTTTTACATCTGACTGCTGGGATACTAGTTGAGTCCTTGTTCAATGCTTTTGCAACTGCTGCTTTTTTCAAGTTTGTGGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATATGGAAGGCAAGTAGGCCTTTCAACAATGGGGAAGGTTGGGAAACGATGAGACGGGAGCTTTCAGTTTTATACAGTCGTTTCTATGGGATCCTGTTGGGTGGCATTCTGCTCATGTATGAGTTTCATAGTTATTTGAGACCTATTATTCTTCTCACGTACTCCTTTTGGATACCTCAAATTATCACCAATGTTGTTCGTGATTCACGCAAACCATTGCATCCTCATTACATCCTAGGGATAACCATCACTCGGCTAGCAATCCCATTATATACTTTCGGTTGCCCTAACAATTTCATGCGCATCGAACCCCACAAGAACTGGTGTATTTGTTTGGTTGTATTTGTTGGATTTCAAGCAGGAGTTCTTTTGCTTCAGCACTACCTTGGATCCCGTTGCTTCATTCCTCGACAGATTCTGCCTGATAAATATAGCTATCAAAGGAGGTTTGATCAAGACAGAGGCCATGCTTCAGACTGTGTTATTTGCATGACGGCCATTGATTTTTATCAGAGATCCAACGAATGCATGGTAACACCTTGCGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGTCCGACTTGCCGGCGGCCGCTGCCTCCTGCCTAG 1731 0.4188 MVCLRLDMVASRRLGSWLSKRRGLGFLLQVTFWWWAILLFIRPVAGLRPLRERTRSWGDEWLITRKVESELGPFSQWNITGTYKGTWKFLDTTNGSSRFPDIRKTNGNTVIELISTPTKINGVHYVQGVVIFHDVFDNEYNVGGAQIRVEGVYIWPFRQLRMVASSGKEGELSQGEDNILSNPYHLLGVFSSQVFQESSRDKMWRRKHSPIYDVEKRCNFEIAAQISRLSSSKNDGDQDLFRLEGLTESPSTDDDGDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIFMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPFNNGEGWETMRRELSVLYSRFYGILLGGILLMYEFHSYLRPIILLTYSFWIPQIITNVVRDSRKPLHPHYILGITITRLAIPLYTFGCPNNFMRIEPHKNWCICLVVFVGFQAGVLLLQHYLGSRCFIPRQILPDKYSYQRRFDQDRGHASDCVICMTAIDFYQRSNECMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0744 576 ProSiteProfiles Zinc finger RING-type profile. 526 570 IPR001841 -
Alju10g0744 576 FunFam E3 ubiquitin-protein ligase, putative 512 576 - -
Alju10g0744 576 SMART ring_2 526 569 IPR001841 -
Alju10g0744 576 Pfam Ring finger domain 525 570 IPR001841 -
Alju10g0744 576 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 511 576 IPR013083 -
Alju10g0744 576 SUPERFAMILY RING/U-box 514 575 - -
Alju10g0744 576 CDD RING-H2_TUL1-like 522 575 - -
Alju10g0744 576 PANTHER RING ZINC FINGER PROTEIN 136 575 - -
Alju10g0744 576 SMART ringv_2 525 570 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0744 Alju-ChrAlju10 6380556 6389094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0744 523 574 C3H Transcription Factor Family AT1G53010 37.736 3.98e-08 51.6