Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0739 ATGAATTCAACCACCATCGTCTTCAGAAACTCAAAAAGCAGCTTCTTCGCAAAACTAACAAACATAATGGAAGCTCAAGGAAGCCATAACCACCCTCCTCCGCCTCCTCCTCCGCCGACCAAAGTCGAAAGAAAAATCATTGAGAAAAACAGAAGAAACCAGATGAAGTTCCTCTACTCTAAGCTCAATTCTCTCCTCCCTAACCACAATCCTAAGGAACTACTGCCACTGCCTGATCAGATAGATCAGGCGATAAACTACATAAAGTGTTTGGAGGCGAAGGTGAAGATGTCTCAAGAGAAGAAAGAAAGCTTTACGGGAAAGAAAAGGTCCCTTGCCAGCTGCTCAAGTAGTGCTATTGACATTAATAAGAACAAAAGTGTGGTGAGATCACCTGAAATTGAGATTCGTGAAGTGGGTTCGTCTCTAGAGATTGTTCTGATCACAGGATTAGATAACCAGTTCGTTTTCTATGAGATCCTTCGAATACTTCATGAAGAGAACATAGAAGTCGTTAGTGCTAACTCTTCTCTTTCTGGTGACTCAATGCATCACGTAGTGCATGCAGAGATTGGGCAATCGTTGTTTCGATTCGGAGCAACCAAGGTAAGCGAGAGGCTAAAAAGATTTGTGTATGGATCATCAAGTGATGTGGAAATAAACCCAGAGTTGTGGGATTTTGACAATATTGCTTCTGAACCCTGGGACTTCTAA 714 0.423 MNSTTIVFRNSKSSFFAKLTNIMEAQGSHNHPPPPPPPPTKVERKIIEKNRRNQMKFLYSKLNSLLPNHNPKELLPLPDQIDQAINYIKCLEAKVKMSQEKKESFTGKKRSLASCSSSAIDINKNKSVVRSPEIEIREVGSSLEIVLITGLDNQFVFYEILRILHEENIEVVSANSSLSGDSMHHVVHAEIGQSLFRFGATKVSERLKRFVYGSSSDVEINPELWDFDNIASEPWDF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0739 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 91 IPR011598 GO:0046983
Alju10g0739 237 FunFam Transcription factor bHLH162 34 117 - -
Alju10g0739 237 Gene3D - 39 119 IPR036638 GO:0046983
Alju10g0739 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 114 IPR036638 GO:0046983
Alju10g0739 237 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 40 212 - -
Alju10g0739 237 Pfam Helix-loop-helix DNA-binding domain 41 92 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0739 Alju-ChrAlju10 6319384 6320454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0739 42 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.857 9.14e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju10g0739 HLH 2.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0739 10 6319384 6320454 Alju10g0739 10 6319384 6320454 ECH