Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0735 ATGGGTTGCATATGTTCCAAGACATCAGCTGTGGAAGACAGCCGTGAAGATTTGACAAAGAAATCATTATCTAGCAAGAGAGGGTCAGAGCTGCGTGTTTCAAGGTTGAATTCCTCTAAAAGAAACGAGGGGATTTGGGAAACAGATAAGTTAGATGGAAATGATGTGAAGATTTCATTGATTGACAAGAAAACCAATGGCTCATTTCAGTTGCATGATGATCAAGTGGGGAATAAGGAAATAGAAAAGCCTGGATTAACTGTCCTTAACAATCCTGGCCTTGGAAAGGTTCCAAAGGCTGCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCCAGTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCTCGAAGCGCCAATACTTTTGAGAGGTTAAATAGAATTGGCCAAGGAACTTACAGTACTGTTTATAAAGCACGTGATTTGACTCACCAAAAGATTGTTGCTTTGAAGAGAGTTCGGTTTGATAATCTTGATCCTGAGAGTGTAAAGTTTATGGCTAGGGAAATCCTCCTTCTGCGTAGACTTGATCATCCGAATATAATCAAGTTGGAAGGCTTGATAACATCTCAGACCTCTCGCAGCTTGTACCTCATTTTTGAGTATATGGAGCATGATCTTTCTGGACTAGCATCACGTCCTGGCATCAAGTTTTCTGAACCACAGGTTAAATGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCATCGTGATATAAAGGGCTCAAATCTTCTCATTGACAACAATGGCATCTTAAAAATTGCAGATTTTGGGTTGGCAAGTTTCTTTGACCCCAATCATAGTGTTCCATTGACCAGTCGAGTAGTTACTCTCTGGTATAGGCCTCCAGAACTTTTACTTGGAGCATCTCATTATGGAGTCGCGGTAGATTTATGGAGCTCTGGTTGCATACTTGGGGAATTATACACTGGCAGGCCTATATTGCCAGGAAAAACTGAGGTTGAGCAACTGCACAGGATTTTCAAGCTTTGTGGATCACCATCTGAGGACTATTGGCTTAAACAGCGATTGCCACATGCTGCAGTATTCAGGCCTCCACACCGTTACAGACGAAGTATTGCAGAAACATTTAATGAATATCCATCTGCTTCGGTGAGGCTTATAGAGACACTACTTTCTATAGATCCTGCACAACGAGGGACAGCAGCAAGTGCTCTAAAGAGTGAGTTCTTCACTACAGAGCCCTTTGCTTGTGATCCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAGATTGATTCTAAATTACGGGATGAAGAAACCAGAAGGCGAGGAGCTATCAGAGGAAGGGAGCAGAAAGTTGGCTCAGGAGCTAGAAAAGAAAAGGAACCTGGGATGACTATTCTATCAAAGCGCAATGTCGACCCACGCATATCAACACAGGGACAACATTCCAATTCAAACAGCCGAAGTGAAGTGTTTCACCACCCTCACAGAGAACCTGTTTCTGGATTTTTGGTTTATCCCCCACAGAACCAGTCACATGTTAAAGAAATGGAAAATAATTTCAGTGGGCATATTTATAAGAGGCCTTCACATTCAGGTCCACTAGTTCCGGGTATCCAATTATCAAGGGGCGGAAAGGAAGTTGACGAAGGGCCTCTTGGTTCGAACAGAATCAACTTGTCAAAACTATCTGGCTTAGTTTCATCGAGGACTTCATCATCTGAACGAGAGGAAAAACCAGTTTCTCTGCTTCCTAGAAAAACAATTGAAGTTAAAAAACCTGTGGAGTCAACTAATAATGTATCAGACTCAAGAAGGCATGAGAGGAAACGCCACTCCCCACGAATTTTGGATTTCAATCGGTTAGACAATGCAAGAGGCTCCACTCAAGAATTAACTCCAGGAGGCCGTGGGTATATGGAAAACAAGATATATCTCTCTGGTCCATTACTAGCATCTTCAAACAACATGGATCAGATGCTTAAAGAGCACGATCGAAAGATCCAAGAATTTTCAAGACGAGCACGAATTGACAAGTCAAGAGGTGGGAAATTTCGTGCACATAGAAAGTAG 2097 0.4268 MGCICSKTSAVEDSREDLTKKSLSSKRGSELRVSRLNSSKRNEGIWETDKLDGNDVKISLIDKKTNGSFQLHDDQVGNKEIEKPGLTVLNNPGLGKVPKAAEGEQVAAGWPSWLSSVAGEAIKGWIPRSANTFERLNRIGQGTYSTVYKARDLTHQKIVALKRVRFDNLDPESVKFMAREILLLRRLDHPNIIKLEGLITSQTSRSLYLIFEYMEHDLSGLASRPGIKFSEPQVKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSSGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKQRLPHAAVFRPPHRYRRSIAETFNEYPSASVRLIETLLSIDPAQRGTAASALKSEFFTTEPFACDPSSLPKYPPSKEIDSKLRDEETRRRGAIRGREQKVGSGARKEKEPGMTILSKRNVDPRISTQGQHSNSNSRSEVFHHPHREPVSGFLVYPPQNQSHVKEMENNFSGHIYKRPSHSGPLVPGIQLSRGGKEVDEGPLGSNRINLSKLSGLVSSRTSSSEREEKPVSLLPRKTIEVKKPVESTNNVSDSRRHERKRHSPRILDFNRLDNARGSTQELTPGGRGYMENKIYLSGPLLASSNNMDQMLKEHDRKIQEFSRRARIDKSRGGKFRAHRK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0735 698 SMART serkin_6 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0735 698 Gene3D Phosphorylase Kinase; domain 1 120 215 - -
Alju10g0735 698 SUPERFAMILY Protein kinase-like (PK-like) 126 423 IPR011009 -
Alju10g0735 698 MobiDBLite consensus disorder prediction 600 627 - -
Alju10g0735 698 MobiDBLite consensus disorder prediction 425 474 - -
Alju10g0735 698 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Alju10g0735 698 MobiDBLite consensus disorder prediction 675 698 - -
Alju10g0735 698 Gene3D Transferase(Phosphotransferase) domain 1 216 454 - -
Alju10g0735 698 FunFam probable serine/threonine-protein kinase At1g54610 216 457 - -
Alju10g0735 698 Pfam Protein kinase domain 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0735 698 MobiDBLite consensus disorder prediction 600 648 - -
Alju10g0735 698 MobiDBLite consensus disorder prediction 436 474 - -
Alju10g0735 698 PANTHER CELL DIVISION PROTEIN KINASE 131 422 - -
Alju10g0735 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Alju10g0735 698 ProSiteProfiles Protein kinase domain profile. 133 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0735 698 CDD STKc_CDK9_like 133 417 - -
Alju10g0735 698 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0735 Alju-ChrAlju10 6246664 6250889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0735 125 553 Core Cell Cycle Gene Families AT5G10270 41.850 5.40e-112 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju10g0735 Pkinase 4.3e-67 CL0016