Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0714 ATGCAGCGCTACCGTAGCTCTGACGTCGTGATTTTCATCCCATTGTTGATTCATGTCCTGCGGGTAAACGCTCAGGTGCAGCTTCAGCACCGGGTTTTAGACCCGCATTGGTACCCCGGAACCGCCACCTGGTACGGCGACCCCGAAGGAGACGGAAGCAACGGTGGAGCATGTGGATACGGGTCGTTGGTGGACGTGAGGCCGATGAAGGCGAGAGTTGGGGCGGTGGGTCCTGTTCTGTTCATGAACGGAGAGGGGTGTGGAGCCTGCTACAAGGTGAAATGCTTGGACAGGAGCATATGCTCGAAGCGAGCTGTGACGGTGATAATCACCGACGAATGTCCAGGCTGCCCCTCCGACCGCACCCACTTTGACCTCAGTGGTGCCGCATTTGGCCACATGGCTCTTGCCGGCGACAACTCTCTCCTCAGAAACCGTGGTCAAATCCCAGTCGTTTACCGAAGGACACCATGTAAATATCCAGGTAGAAACATTGGCTTCCATGTTAATGAAGGATCCACACCATTTTGGCTATCGATCTTGGTAGAGTTTGAGGATGGAGACGGAGACATTGGCTCTATGCATATTCAAGAAGCAGGGTCAAGTGAGTGGCTTCAGATGAATCATCTGTGGGGTGCAAATTGGAACATTATTGGAGGGCCAATGAAGGGACCTTTCTCTGTGAAATTAAGCACATCCACTGGGAAAACACTTTCTGCAAGAGATGTTATCCCTAGAAACTGGACTCCAAGAGCCACTTACACTTCTCGTCTCAACTTCTTCCACAATTAA 792 0.5177 MQRYRSSDVVIFIPLLIHVLRVNAQVQLQHRVLDPHWYPGTATWYGDPEGDGSNGGACGYGSLVDVRPMKARVGAVGPVLFMNGEGCGACYKVKCLDRSICSKRAVTVIITDECPGCPSDRTHFDLSGAAFGHMALAGDNSLLRNRGQIPVVYRRTPCKYPGRNIGFHVNEGSTPFWLSILVEFEDGDGDIGSMHIQEAGSSEWLQMNHLWGANWNIIGGPMKGPFSVKLSTSTGKTLSARDVIPRNWTPRATYTSRLNFFHN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0714 263 CDD DPBB_EXPB_N 37 158 - -
Alju10g0714 263 Pfam Expansin C-terminal domain 165 245 IPR007117 -
Alju10g0714 263 PRINTS Major pollen allergen Lol pI signature 135 150 IPR005795 GO:0005576|GO:0019953
Alju10g0714 263 PRINTS Major pollen allergen Lol pI signature 113 128 IPR005795 GO:0005576|GO:0019953
Alju10g0714 263 PRINTS Major pollen allergen Lol pI signature 167 182 IPR005795 GO:0005576|GO:0019953
Alju10g0714 263 PRINTS Major pollen allergen Lol pI signature 232 249 IPR005795 GO:0005576|GO:0019953
Alju10g0714 263 PRINTS Major pollen allergen Lol pI signature 183 198 IPR005795 GO:0005576|GO:0019953
Alju10g0714 263 Gene3D - 22 158 IPR036908 -
Alju10g0714 263 SMART dpbb_1 73 153 IPR007112 -
Alju10g0714 263 FunFam Beta-expansin 3 160 261 - -
Alju10g0714 263 Pfam Lytic transglycolase 78 153 IPR009009 -
Alju10g0714 263 SUPERFAMILY PHL pollen allergen 163 256 IPR036749 -
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 204 218 IPR007118 GO:0005576
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 242 256 IPR007118 GO:0005576
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 54 72 IPR007118 GO:0005576
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 36 51 IPR007118 GO:0005576
Alju10g0714 263 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Alju10g0714 263 Gene3D - 159 257 IPR036749 -
Alju10g0714 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 55 163 IPR007112 -
Alju10g0714 263 PANTHER EXPANSIN-B3 18 260 - -
Alju10g0714 263 SUPERFAMILY Barwin-like endoglucanases 32 162 IPR036908 -
Alju10g0714 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 256 IPR007117 -
Alju10g0714 263 FunFam Expansin B3 23 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0714 Alju-ChrAlju10 6052211 6054874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0714 7 198 Expansin Gene Family AT4G28250 65.625 2.52e-90 264