Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0696 ATGGGGTGTTGTGTATCCACAAGCAGTCGAAGTACTTGTAGTAGCAGGAGCAATGGCGACACAATCTCTCCATCTTGTTTGGAAGTAGGTTTCTGTGGGCAAAAGAGAATAAGAAGAACATTCTCTGATCATGTCATTGCTCTGCAGAATCTTCCATCCCTTCCTAATCGAATTTTCACCAATGGAAAGAGCCGAAGTTCTTGTATATTCACACAGCAAGGAAAAAAGGGTATCAATCAGGATGCCATGATTGTATGGGAAGACTTTATCTCCGAAGATGCAATTTTCTGCGGTGTCTTTGATGGCCATGGTCCATATGGTCATGTTGTTGCACGCAATGTGAGGGATACTTTGCCTGTAAAACTACTTTCATTTTTGCACTCTTGTGAATCAAAGAGAAATGGATCAGGCTCAGGCTCAGGCAAAGCTTGTTTCAAGGGGAATACCGAAGATGGAGTCTGCGAGAAGGATTGTTCTGTTGAGGATGTAGTGAATTCTGTCTGGAGAGAAGCTTTCATGAAGGCTTACAAGGCAATGGACAAAGAACTTAGGTCACATCCGAATTTGGACTGCTTCTGTAGTGGGAGCACAGCCGTCACTATCGTGAAGCAGGGTTCAAATCTGTTCATGGGCAACATTGGGGATTCGCGAGCAATCATGGGATCCAAAGACGAAAATGATTCCATGGTGGCCATTCAGTTAACTGTTGATTTGAAGCCGGATTTGCCAAGGGAAGCAGAACGAATTAAACGGTGCAAAGGCAGAGTATTTGCACTGCAGGATGAGCCTGAGGTTCCCAGGGTGTGGTTGCCTTTTGATGATGCACCCGGATTAGCAATGGCTCGAGCATTCGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAGTTTTCTCATAGACTGCTTACAGATAGAGATCAGTTCATTGTTCTTGCCTCCGATGGGGTGTGGGATGTGTTAAGTAATGAAGAGGTGGTTGAGATAGTAGCTTCAGCACCGACTCGTTCGTCGGCTGCAAGGATTCTGGTGGATTCCGCGGCTCGGGAGTGGAAGCTTAAGTATCCAACGTCAAAGATGGATGACTGTGCTGTTGTGTGTTTGTTTTTGGATGGGAAGATGGACTCAGAATCTGATTATGACGAGCCAGGCTTTTCTTCAGCAACCATCCAGAGCAACCATTCTGGCAATCCAGTTGAATCAGACGACGGCCAGAAGTCCGAGCCATCTCTGCACCGGAACTTCACTGTGAGATCTGCTGATGAAAATGAGACTTATGGAGGACTGCCACTGGTGGACGTCGTCGAAGATGGAACGACGTCAGATCAAAGCTGGTCAGGTTTGGAAGGTGTGACCCGTGTAAATTCACTGGTTCAGCTTCCTCGATTTTCCGAGGAAAGGCCAAACACTTGA 1419 0.4637 MGCCVSTSSRSTCSSRSNGDTISPSCLEVGFCGQKRIRRTFSDHVIALQNLPSLPNRIFTNGKSRSSCIFTQQGKKGINQDAMIVWEDFISEDAIFCGVFDGHGPYGHVVARNVRDTLPVKLLSFLHSCESKRNGSGSGSGKACFKGNTEDGVCEKDCSVEDVVNSVWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDENDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVASAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEPGFSSATIQSNHSGNPVESDDGQKSEPSLHRNFTVRSADENETYGGLPLVDVVEDGTTSDQSWSGLEGVTRVNSLVQLPRFSEERPNT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0696 472 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Alju10g0696 472 MobiDBLite consensus disorder prediction 384 406 - -
Alju10g0696 472 MobiDBLite consensus disorder prediction 1 20 - -
Alju10g0696 472 MobiDBLite consensus disorder prediction 381 412 - -
Alju10g0696 472 FunFam probable protein phosphatase 2C 52 57 375 - -
Alju10g0696 472 PANTHER PROTEIN PHOSPHATASE 65 370 IPR015655 GO:0004722|GO:0006470
Alju10g0696 472 Pfam Protein phosphatase 2C 145 349 IPR001932 -
Alju10g0696 472 Gene3D - 57 380 IPR036457 -
Alju10g0696 472 SMART PP2C_4 55 370 IPR001932 -
Alju10g0696 472 CDD PP2Cc 65 372 IPR001932 -
Alju10g0696 472 SUPERFAMILY PP2C-like 57 374 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0696 Alju-ChrAlju10 5805649 5808203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0696 1 472 PP2C-type Phosphatase Gene Family AT1G03590 68.750 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0696 10 5805649 5808203 Alju10g0696 10 5805649 5808203 ECH