Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0643 ATGGCTAAATTACCTTCGCCTGGGCGTAAAGCATGGTCTTCCATTGCCAAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAAGAAGCTCTTGGAGTGCAACCATGCGGAAAAATCTGAGTTGAAAACGAAGGCTAGTGGTACTTATGAAGGAGAAGCAACAAAGTATTTGGAACCTGAAAACCCTATGCTTGTTTTTTCTGCCGCTTCCTCCAGTGATATCTCATCAGAAAGTTCACCACCCATCTACAATTCGTCTTCATCTTTTTCCTTCGGAGGAGAAAGTGTTGCTAATGCTGCTGTATGTGAAGTATTTGAAGAATTCGGAGATTTTTGGACCCAACCATTTCTCCCAGAAAATATATGTGACCAAAATAACTACTATAGTCTAAACTATGCAGAACATGAAGCAGACCTGGATGAATATTCCTCATATATCTTCGATAATGCTGATTTTTTGTGCCAAGTGATGCAAGAATCCCCAGAAGATCCTAAAAAGGATTTATAA 531 0.4011 MAKLPSPGRKAWSSIAKRLPGRSDNEIKNHWHSHLKKLLECNHAEKSELKTKASGTYEGEATKYLEPENPMLVFSAASSSDISSESSPPIYNSSSSFSFGGESVANAAVCEVFEEFGDFWTQPFLPENICDQNNYYSLNYAEHEADLDEYSSYIFDNADFLCQVMQESPEDPKKDL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0643 176 Gene3D - 2 63 - -
Alju10g0643 176 ProSiteProfiles Myb-like domain profile. 8 35 IPR001005 -
Alju10g0643 176 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 11 133 - -
Alju10g0643 176 CDD SANT 8 35 IPR001005 -
Alju10g0643 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 39 IPR017930 -
Alju10g0643 176 Pfam Myb-like DNA-binding domain 8 35 IPR001005 -
Alju10g0643 176 MobiDBLite consensus disorder prediction 1 25 - -
Alju10g0643 176 SUPERFAMILY Homeodomain-like 8 42 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0643 Alju-ChrAlju10 5442992 5443897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0643 12 56 MYB Transcription Factor Family AT3G23250 57.778 5.34e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju10g0643 Myb_DNA-binding 2.7e-07 CL0123