Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0642 ATGAGAGGCCCTTACTATGACAGAAATGGAATAAAGAGAGGTGCTTGGAGCAAGGAAGAGGATGAAAGGTTAAGAGCATATGTTGAGAGATACGGACACAGTAATTGGCGTCAACTTCCCAAACACGCAGGTTTATCAAGGTGCGGAAAGAGTTGCAGACTGCGATGGCTAAATTACCTTCGCCCGGATGTAAAGCGCGGGAATTTCACTCATGAAGAAGACGAAACCATCATCCAATTACGTCAACAACATGGAAATAAATGGTCTTTGATTGCAGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAGGAAGCACTTGGAGTGCAATCACGGGACAAAATCTGAGTTCAAAATGAAACCTAGTGATGCTTGTAAAGGAGAAACTGCAAAGTATTTCGAACCTGAAAACCCTTTGCTCGGTTTTGATTCTGCTTCCTCCAGCAATATCTCAGAAAGCTCACCACCTAGGTACTGTTCATTATCAACCTTTGCCAACGGAGAAGAAGTATATGAAGAATTCCGAGATTTTTGGACGCAACCATTTGTCCCAGAGAACACGTATATGCAGGATTATGACTATTATAGTCTGAACTATGCAGCGGATGGAGCTGAGGTAGACGAGTATTCCTCGTACCTCTTGGATAATGCTGATTTTTTGTGCCAAGTCATGCAAGAATTTCCGGAAAATCCTACAAAGGATATAGTATATGCAAATTATTAA 747 0.419 MRGPYYDRNGIKRGAWSKEEDERLRAYVERYGHSNWRQLPKHAGLSRCGKSCRLRWLNYLRPDVKRGNFTHEEDETIIQLRQQHGNKWSLIAERLPGRSDNEIKNHWHSHLRKHLECNHGTKSEFKMKPSDACKGETAKYFEPENPLLGFDSASSSNISESSPPRYCSLSTFANGEEVYEEFRDFWTQPFVPENTYMQDYDYYSLNYAADGAEVDEYSSYLLDNADFLCQVMQEFPENPTKDIVYANY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0642 248 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Alju10g0642 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Alju10g0642 248 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Alju10g0642 248 FunFam MYB-related transcription factor 12 65 - -
Alju10g0642 248 CDD SANT 68 111 IPR001005 -
Alju10g0642 248 SMART sant 12 62 IPR001005 -
Alju10g0642 248 SMART sant 65 113 IPR001005 -
Alju10g0642 248 CDD SANT 15 60 IPR001005 -
Alju10g0642 248 Gene3D - 13 65 - -
Alju10g0642 248 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Alju10g0642 248 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Alju10g0642 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 152 - -
Alju10g0642 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Alju10g0642 248 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Alju10g0642 248 Gene3D - 67 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0642 Alju-ChrAlju10 5436411 5437930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0642 2 118 MYB Transcription Factor Family AT2G31180 64.957 3.19e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0642 Myb_DNA-binding 5.8e-16 CL0123