Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0640 ATGTTGAGAGATACGGACACAGTAATTGGCGTCAACTTCCCAAACACGCAGCTTGGAAATAAATGGTCTTCCATTGCCAAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAAGAAGCTCTTGGAGTGCAACCATGCGGAAAAATCTGAGTTGAAAACGAAGGCTAATGGTACTTATGAAGGAGAAGCAACAAAGTATTTGGAACCTGAAAACCCTATGCTTGTTTTTTCTGCCGCTTCCTTCAGTGATATCTCATCAGAAAGTTCACCACCCATCTACAATTCGTCTTCATCTTTTTCCTTCGGAGGAGAAAGTGTTGCTAATGCTGCTGTATGTGAAGTATTTGAAGAATTCGGAGATTTTTGGACCCAACCATTTCTCCCAGAAAATATATGTGACCAAAATAACTATTATAGTCTAAACTATGCAGAAAATGAAGCAGACGTGGATGAATATTCCTCATATATCTTCGATAATGCTGATTTTTTGTGCCAAGTGATTCAAGAATCCCCAGAAGATCCTAAAAAGGATATATAA 561 0.3904 MLRDTDTVIGVNFPNTQLGNKWSSIAKRLPGRSDNEIKNHWHSHLKKLLECNHAEKSELKTKANGTYEGEATKYLEPENPMLVFSAASFSDISSESSPPIYNSSSSFSFGGESVANAAVCEVFEEFGDFWTQPFLPENICDQNNYYSLNYAENEADVDEYSSYIFDNADFLCQVIQESPEDPKKDI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0640 186 CDD SANT 20 45 IPR001005 -
Alju10g0640 186 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 49 IPR017930 -
Alju10g0640 186 SUPERFAMILY Homeodomain-like 17 52 IPR009057 -
Alju10g0640 186 Pfam Myb-like DNA-binding domain 17 45 IPR001005 -
Alju10g0640 186 ProSiteProfiles Myb-like domain profile. 17 45 IPR001005 -
Alju10g0640 186 Gene3D - 14 73 - -
Alju10g0640 186 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 16 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0640 Alju-ChrAlju10 5404087 5405210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0640 18 157 MYB Transcription Factor Family AT3G23250 32.278 3.81e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju10g0640 Myb_DNA-binding 4.8e-09 CL0123