Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0639 ATGGCTGTTCATCAAGTGGTGATGATGAGAGGCCCTTACTATGACAGAAATGGAATAAAGAGAGGTGCTTGGAGCAAGGAAGAGGATGAAAGGTTAAGAGCATATGTTGAGAGATACGGACACAGTAATTGGCGTCAACTTCCCAAACACGCAGGTTTATCAAGGTGCGGAAAGAGTTGCAGACTGCGATGGCTAAATTACCTTCGCCCGGATGTAAAGCGCGGGAATTTCACTCATGAAGAAGACGAAACCATCATCCAATTACGTCAACAACATGGAAATAAATGGTCTTTGATTGCAGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCATTGGCATAGCCACCTAAGGAAGCACTTGGAGTGCAATCACGGGGCAAAATCTGAGTTCAAAATGAAACCTAGTGATGCTTGTAAAGGAGAAACTGCAAAGTATTTCGAACCTGAAAACCCTTTGCTCGGTTTTGATTCTGCTTCCTCCAGCAATATCTCAGAAAGCTCACCACCTAGGTACTGTTCATTATCAACCTTTGCCTACGGAGAAGAAGTATATGAAGAATTCCGAGATTTTTGGACGCAACCATTTGTCCCAGAGAACACGTATATGCAGGATTATGACTATTATAGTCTGAACTATGCAGCGGATGGAGCTGACGTAGACGAGTATTCCTCGTACCTCTTGGATAATGCTGATTTTTTGTGCCAAGTCATGCAAGAATTTCCGGAAAATCCTACAAAGGATATAGTATATGCAAATTATTAA 771 0.4215 MAVHQVVMMRGPYYDRNGIKRGAWSKEEDERLRAYVERYGHSNWRQLPKHAGLSRCGKSCRLRWLNYLRPDVKRGNFTHEEDETIIQLRQQHGNKWSLIAERLPGRSDNEIKNHWHSHLRKHLECNHGAKSEFKMKPSDACKGETAKYFEPENPLLGFDSASSSNISESSPPRYCSLSTFAYGEEVYEEFRDFWTQPFVPENTYMQDYDYYSLNYAADGADVDEYSSYLLDNADFLCQVMQEFPENPTKDIVYANY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0639 256 Gene3D - 21 73 - -
Alju10g0639 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Alju10g0639 256 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Alju10g0639 256 CDD SANT 76 119 IPR001005 -
Alju10g0639 256 FunFam MYB-related transcription factor 20 73 - -
Alju10g0639 256 CDD SANT 23 68 IPR001005 -
Alju10g0639 256 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Alju10g0639 256 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Alju10g0639 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 152 - -
Alju10g0639 256 SMART sant 20 70 IPR001005 -
Alju10g0639 256 SMART sant 73 121 IPR001005 -
Alju10g0639 256 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Alju10g0639 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Alju10g0639 256 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Alju10g0639 256 Gene3D - 75 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0639 Alju-ChrAlju10 5389851 5392263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0639 8 126 MYB Transcription Factor Family AT2G31180 64.706 9.44e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0639 Myb_DNA-binding 6.1e-16 CL0123