Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0638 ATGGTGAGAGGTCCTTTCTTCGACGCAAATGGAGTTAAGAAAGGTGCATGGAGCGAAGAAGAAGACCAGAAGCTCATTTCTTTTATTCAGACCCATGGCCATCCTAATTGGCGCCAACTTCCCAAGTTAGCAGGGTTAGCAAGATGTGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATCTGAAACGTGGCAACTATACTGCACAAGAGGAGGAAATCATCCTCAAACTACACGAACAACATGGAAATAAGTGGTCGCTGATTGCTGAGAAGTTACCTGGAAGAACAGACAACCATATAAAGAATCATTGGCACAGCCAACTCAAGAGGCGGTCGAGGGACAGAGAAAAGAGTAGTTCTTCTGAGGTGAAAGGCAAGAAGTCAGGCCGTCACAATAATATGACAAAGTATTCGTCAGAAGCTGATATTGTGAAAGTTGTGAATGAGTTAAGTAACATATTAGAAAGCTCATCACTGGACTTTATGGAAACGACGTCGTCGACCCTGGCCGAGCAAGACAACTACTCTCCTTCCTTGCCTTCCATTGATACAAAATCTACCACCACCAAAAATTCGCCTGAAGAATATAATAGCGTGGCTTTGAGGGAAGTTTATAAATTCCAAGAATTTAGCGGCGATTTTTGGACTGAGCCGTTTGTATCAGAAGATATTTACAGTGAATATTGCTATCCAAATAATGGAGCCGCCGTAGACTTATTTTCATATGATGGCGCACTCTTGTTTTTCTAA 762 0.4291 MVRGPFFDANGVKKGAWSEEEDQKLISFIQTHGHPNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKRGNYTAQEEEIILKLHEQHGNKWSLIAEKLPGRTDNHIKNHWHSQLKRRSRDREKSSSSEVKGKKSGRHNNMTKYSSEADIVKVVNELSNILESSSLDFMETTSSTLAEQDNYSPSLPSIDTKSTTTKNSPEEYNSVALREVYKFQEFSGDFWTEPFVSEDIYSEYCYPNNGAAVDLFSYDGALLFF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0638 253 SMART sant 66 114 IPR001005 -
Alju10g0638 253 SMART sant 13 63 IPR001005 -
Alju10g0638 253 MobiDBLite consensus disorder prediction 102 141 - -
Alju10g0638 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju10g0638 253 CDD SANT 16 61 IPR001005 -
Alju10g0638 253 MobiDBLite consensus disorder prediction 102 133 - -
Alju10g0638 253 Gene3D - 68 143 - -
Alju10g0638 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 185 - -
Alju10g0638 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju10g0638 253 Gene3D - 7 67 - -
Alju10g0638 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju10g0638 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju10g0638 253 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Alju10g0638 253 CDD SANT 69 109 IPR001005 -
Alju10g0638 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju10g0638 253 FunFam MYB-related transcription factor 13 66 - -
Alju10g0638 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju10g0638 253 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0638 Alju-ChrAlju10 5383416 5384522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0638 1 115 MYB Transcription Factor Family AT1G06180 66.087 4.19e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0638 Myb_DNA-binding 1.7e-14 CL0123