Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0637 ATGGTGAGGACCTCAAGCTATAACCAAAATGGCATCAGGAAAGGAACATGGACACCAGAGGAAGACATGAAGTTGGTTGCCTACGTTACTAGGTATGGCTGTTGGAATTGGCGACTACTCCCCAAGTTTGCTGGATTGGCGAGGTGTGGAAAGAGTTGCAGGCTGCGGTGGATGAACTATCTAAGACCAGACATCAAAAGAGGGAATTACACTCCACAAGAAGACCACACTATCATCACACTTCGCCAACAACTGGGTTATAGGTGGTCAAGAATTGCTTCTTGTTTACCCGGAAGAACAGATAACGAAGTAAAAAACCACTGGCACACCAATCTTAAGAAGAGGGTTCAAGAAAACTCAGTTGCGCATGAAAAAGATAAAGCCTTCAAGTCAAAGGATCAAATTCCATTAATTGAATCCAGTCAAGAGAAGAGCGAGTCTTCAGTCACTATTAGTACAACCTCTGGTCCTTCTTCACAATGTGATTCAGTAGCGGACGAGTCGTCCCAAATATTCTCAAGCACCTTCCAAATGACTTCCACAGATACTGGTGCTTTCATTGAGACTACGAGTGAAAATTTGATTGAGCAAGATTATTGTTATAACTTAGCTGTGCCAGATGCGTTCATTGAGACTATGAGTGAAAATTTTTGGACAGATCCGTACATGGTTGACGTTTCGTCCGTCCCCCGTGAAGAAGCATTGTTACCCTTGTCCCCTGAATATGAATACGTTGCACATCTTTGGGCACACGACGCATAG 762 0.437 MVRTSSYNQNGIRKGTWTPEEDMKLVAYVTRYGCWNWRLLPKFAGLARCGKSCRLRWMNYLRPDIKRGNYTPQEDHTIITLRQQLGYRWSRIASCLPGRTDNEVKNHWHTNLKKRVQENSVAHEKDKAFKSKDQIPLIESSQEKSESSVTISTTSGPSSQCDSVADESSQIFSSTFQMTSTDTGAFIETTSENLIEQDYCYNLAVPDAFIETMSENFWTDPYMVDVSSVPREEALLPLSPEYEYVAHLWAHDA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0637 253 CDD SANT 69 112 IPR001005 -
Alju10g0637 253 MobiDBLite consensus disorder prediction 115 164 - -
Alju10g0637 253 SMART sant 13 63 IPR001005 -
Alju10g0637 253 SMART sant 66 114 IPR001005 -
Alju10g0637 253 CDD SANT 16 61 IPR001005 -
Alju10g0637 253 MobiDBLite consensus disorder prediction 115 139 - -
Alju10g0637 253 Gene3D - 14 66 - -
Alju10g0637 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju10g0637 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju10g0637 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju10g0637 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju10g0637 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju10g0637 253 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju10g0637 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju10g0637 253 FunFam MYB-related transcription factor 13 66 - -
Alju10g0637 253 Gene3D - 68 137 - -
Alju10g0637 253 MobiDBLite consensus disorder prediction 140 164 - -
Alju10g0637 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0637 Alju-ChrAlju10 5323209 5326197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0637 1 155 MYB Transcription Factor Family AT2G31180 54.839 4.15e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0637 Myb_DNA-binding 9.1e-13 CL0123