Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0636 ATGCATATCCATGGGGTACATATACGTCTAATATTCATACATACTGTTCAGATGAGGAGCCCTCGTAGTGACACAAATGGATTGAAGAAAGGCACATGGACACCAGAAGAAGACCGCAAGCTCATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCTAGGTTTGCAGGTCTGGCAAGGTGTGGGAAGAGTTGCAGGCTGAGGTGGCTCAATTACCTGAGGCCCGACATTAAAAGAGGCAATTACACTAAGGAAGAAGATGAACTTATCATCAAACTCCACCGCCAGCTTGGTAACAGATGGTCTGTTATAGCAGCTAAGTTACCGGGAAGAACAGACAATGAGATAAAGAACTACTGGCACACCAACCTCAAAAACAAGAACAAAAGTCAATCTCAAAACAACTCAGTCATAGATGGGAATGATGGAATTATCGTCAAGGAAGGCAGCCAATATCATTCTCAAGGTATCACTACTGACTCTGCAACTTCCAAGGACAATGGGAAATCGGGGTCTGAGTCATCAAGCTCGCCGAGTGAATCCTCGGACATAACGACGTCGTCGGAGAGTAACCAGGATTCGGTCAGAGATCATGAGTTCTCTTTTCTGGATGCGTATAATAATGATAAGCCAATGAGTGGAAATTTCTGGACGGATCCATGTGTGGTTGATTCTGATGACCTCCACTTCTACCCTAATACTGAATTAACGCCGATCGAGAATGAAGCTCAAGTTTTTGCTCCTTTCTACAATACGACGCAGCTTTGGACTCACAATTTCTCCGACCAATATTGTGGTCTCTTCTACAATTCTAATCAATAG 834 0.4412 MHIHGVHIRLIFIHTVQMRSPRSDTNGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPDIKRGNYTKEEDELIIKLHRQLGNRWSVIAAKLPGRTDNEIKNYWHTNLKNKNKSQSQNNSVIDGNDGIIVKEGSQYHSQGITTDSATSKDNGKSGSESSSSPSESSDITTSSESNQDSVRDHEFSFLDAYNNDKPMSGNFWTDPCVVDSDDLHFYPNTELTPIENEAQVFAPFYNTTQLWTHNFSDQYCGLFYNSNQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0636 277 Gene3D - 22 83 - -
Alju10g0636 277 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Alju10g0636 277 MobiDBLite consensus disorder prediction 160 195 - -
Alju10g0636 277 CDD SANT 32 77 IPR001005 -
Alju10g0636 277 FunFam MYB-related transcription factor 29 82 - -
Alju10g0636 277 Gene3D - 85 145 - -
Alju10g0636 277 SMART sant 82 130 IPR001005 -
Alju10g0636 277 SMART sant 29 79 IPR001005 -
Alju10g0636 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 18 203 - -
Alju10g0636 277 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Alju10g0636 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Alju10g0636 277 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
Alju10g0636 277 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Alju10g0636 277 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Alju10g0636 277 CDD SANT 85 128 IPR001005 -
Alju10g0636 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Alju10g0636 277 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0636 Alju-ChrAlju10 5310503 5311647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0636 19 228 MYB Transcription Factor Family AT2G31180 48.571 9.64e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0636 Myb_DNA-binding 9.7e-13 CL0123