Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0635 ATGCCAAACGTGTCCTTCCCTATAAATGCACAACATGTGGAAGTAGGTAATGCTGGGGAATGTGAGTACACGTGCTTGAATAATTGCCCTTGCTCTGCTTATGCTTATGACAGAAATGGGTGCTTAATTTGGCATGGAGATTTAATAAGTCTGCAGCAATCTCCTGAAGATGACAGTAACAGAAAAACGTTATTTCTAAAACTTGCAGCTTCTGAGTTTCCAGATGCTAAACACAAAAAGCAAGAAATTATTGGCATTGTGGTAGGCTTGGTTGGAGGTATAGGGGTTCTCCTAGCAATTGGCCTCTTTGTGATGATGAGAATGAAAAAGAGAGGAGTTGGATTAGGAAGAACGGTGGCAAGTCCATCGATGACATTCAGGCATTGTGGAGAAATTATTGGTATTGTGATGGGGATTGTAGGTGGTTTAGGGGCTCTCTTGGCCATTCTACTATTTGTGATATTCAGAAGAAGAAGACTTGTTGGAAAAGGAAAATCGGTGCAGGGTTCATTGGTGGCATTTGGGTACAGGGATTTACAAATTGCAACCAAGAATTTCTCTGAAAAACTAGGAGGAGGAAGTTTTAGTTCTGTTTTCAGAGGCACATTGCCGGATTCTAGTGTTATAGCAGTGAAGAAACTTGAAAGCATAAGCCAAGACTTTGGCCTCACAAAGCTTGTTGGAATGGAAATCAACAGAATCCTCGCAACAATGAGAGGGACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGTGTGGCTATCACACCAAAAGTTGATGTTTACAGTTATGGAATGATGCTCTTTGAATTGGTGTCAGGAAGAAGAAACTCCGAGCCATCAAAAGATGGTCAAGTGAAGTTCTTTCCTACATGGGCTGCAAATGTAGTAATCCAAGGAGGCGATGTTCTTGAGCTTTTGGATCCTACATTAGAGAGGAAAGCAGACATTGAGGAGGTCACTAGGATAATAAAACTTGCTTCATGGTGTGTACAAGATGAAGAGTCAAACAGGCCATCCATGTGTCAGATAGTTCCAATTCTTGAGGGATTTTTGGATATGAGTTTGCCTCAAATTCCAAGATCCCTCCTACTGTTTGTTGACAGCTAG 1110 0.4162 MPNVSFPINAQHVEVGNAGECEYTCLNNCPCSAYAYDRNGCLIWHGDLISLQQSPEDDSNRKTLFLKLAASEFPDAKHKKQEIIGIVVGLVGGIGVLLAIGLFVMMRMKKRGVGLGRTVASPSMTFRHCGEIIGIVMGIVGGLGALLAILLFVIFRRRRLVGKGKSVQGSLVAFGYRDLQIATKNFSEKLGGGSFSSVFRGTLPDSSVIAVKKLESISQDFGLTKLVGMEINRILATMRGTRGYLAPEWISGVAITPKVDVYSYGMMLFELVSGRRNSEPSKDGQVKFFPTWAANVVIQGGDVLELLDPTLERKADIEEVTRIIKLASWCVQDEESNRPSMCQIVPILEGFLDMSLPQIPRSLLLFVDS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0635 369 SUPERFAMILY Protein kinase-like (PK-like) 169 214 IPR011009 -
Alju10g0635 369 ProSiteProfiles Protein kinase domain profile. 1 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0635 369 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Alju10g0635 369 Gene3D Transferase(Phosphotransferase) domain 1 207 357 - -
Alju10g0635 369 SMART ntp_6 1 68 IPR003609 -
Alju10g0635 369 ProSiteProfiles PAN/Apple domain profile. 1 69 IPR003609 -
Alju10g0635 369 Pfam Protein kinase domain 220 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0635 369 Pfam PAN-like domain 3 50 IPR003609 -
Alju10g0635 369 PANTHER OS07G0415500 PROTEIN 3 219 - -
Alju10g0635 369 SUPERFAMILY Protein kinase-like (PK-like) 220 361 IPR011009 -
Alju10g0635 369 CDD PAN_AP_plant 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0635 Alju-ChrAlju10 5288142 5289569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0635 196 357 Receptor kinase-like Gene Family AT5G20050 32.544 6.36e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju10g0635 Pkinase 1.2e-14 CL0016