Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0612 ATGAAAACTGAGTTAAAAGGAAGCACTACTTCCATTTCCATTCAATACCCAACTCTCTTCAACGCACCCCACAATAATAATCAAGATCTCTCAGGAGAACTCATAGGGTGTTTGGGAAGTCTCGATGGAGCTTGTATAGAGAAGCTCTTGCTTCATTGTGCTAGTGCTTTAGAGAGTAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTGCTCAATAATGTTGCTTCTCCAATTGGAGACACCAACCAAAGGCTCACTTCGTGGTTCCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTATGTCCTATGAACTTCAACGGACGAAGCAATACCATCCAAAGAAGGCTAATGTCCGTGACGGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATAGGTTTGGGTTTTGTGCTTCTAATAGTGCTATTTTTAAAGCAATTCAAGGGTTTCAAAGAGTGCACATACTAGATTTTAGTATAACCCATTGTATGCAGTGGCCTACTCTTATAGATGCTTTGGCCAAAATCCCAGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTTTCGGCCACGTGTACCTCCTTTGGTCAATATTTCAACAGAAGAAGTTGGGCTGCGTTTGGGGAATTTTGCTAAATTCAGGGATGTCCCTTTTGAATTCAATGTGATTGGAAGGAACACTACATCTTCTGAATTAAGCAATATTAATGATTCATCATCCAGCTTTTTTCCCTTTGAGTCACTGTTAGGTCACTTGAATCCAACTATGTTAAATCTTAGGGAAGACGAAGCTTTGGTGATAAATTGTCAAAACTGGCTACGTTACTTGTCTGATGAAAGAAAGGGCACTTTCCAAGAAGCATCTCCTAGGGACACTTTCATAAATCTAATCAGAAGTCTTAACCCTAGAATAGTACTTTTAGTTGACGAGGATTGTGATCTTAGTGTACCAAGTCTCACGTCAAGAATCACCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACTTTTTTGCCTAAAGATAGCAACCAGAGGGTAGAGTATGAATCTGACATAGGGCAGAAAGTTGAGAACATCATAAGCTTCGAGGGGGTTCAGAGAATAGAGAGATTGGAGAGCGGCGCGAAAATGTCGCAGAGGATGAAAAATGGAGGCTTCTTCAACGTTTCATTCTGTGAAGGAACTGTGAGAGAAGTTAAGGCTTTGCTTGATGAGCATGCAAGTGGATGGGGTATGAAGATAGAAGAAGATAATATGTTAGTTCTCACATGGAAAGGCCATAACTCTGTCTTTGCCACAGCTTGGGTCCCACATGAGTTAAACGATCATATGAGTGTGGGCTGA 1362 0.417 MKTELKGSTTSISIQYPTLFNAPHNNNQDLSGELIGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPIGDTNQRLTSWFLRALISRASRVCPMNFNGRSNTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAIFKAIQGFQRVHILDFSITHCMQWPTLIDALAKIPEGPPEVKITVPSFRPRVPPLVNISTEEVGLRLGNFAKFRDVPFEFNVIGRNTTSSELSNINDSSSSFFPFESLLGHLNPTMLNLREDEALVINCQNWLRYLSDERKGTFQEASPRDTFINLIRSLNPRIVLLVDEDCDLSVPSLTSRITTCFNYLWIPFDALETFLPKDSNQRVEYESDIGQKVENIISFEGVQRIERLESGAKMSQRMKNGGFFNVSFCEGTVREVKALLDEHASGWGMKIEEDNMLVLTWKGHNSVFATAWVPHELNDHMSVG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0612 453 ProSiteProfiles GRAS family profile. 37 442 IPR005202 -
Alju10g0612 453 Pfam GRAS domain family 47 441 IPR005202 -
Alju10g0612 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 431 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0612 Alju-ChrAlju10 5049775 5051136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0612 10 443 GRAS Transcription Factor Family AT3G49950 46.275 6.61e-125 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju10g0612 GRAS 1.3e-86 CL0063