Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0610 ATGGCTGCAAAGCGTCTTCTAGAAGACCCACCACCTGCTTCTTCTTCCGAAGAAGATGAAGAAACTGAGGACGACGCTGCCGAAGAAGACAACGGTGATTCCGAAGAACTGGAAGACGAACAAGATGAAGGTAGCCATCAGAATAACAAGGCCAAGTCTAACGACGATTCTGTCACCAAATCCCTAAAAGATTCAAAAGACCAATCTTCTTCAGAATCGGGCGATGAATCCGGGTCGGAAACGGAGTCCGACGATACCCGGCCCTCGCCAACCGCTTCCGCCTTCACCATCAAACCTATTGCATCCAAACCAATGAAAGATTCCGTGCAGCCCCAGAAAAATTCAGGTAGCCGTAAGTTGGCACTGTCACCAGTGAAGACTGACACCGGCGGTGTGAAGCGCTCCAGGGAAAGCGATGGTGTTGAAAGGAAAGAGTCAAAGAAGAATAAGGTACCTAATGTTCAAGATGAAGATTTGAAAAGGGGATCAGGTGTTCCTCGCCTTTGGAGTGAAGACGACGAGGTTGCGATTTTGAAGGGCATGATCGAGTACCAATCCGAGAAAGGGACTGATCCGTGGGCTGATATGGAGGCTTTTCTTGGATTTATAAAGGAAAATCTTCACGTTGATGTATCTAAGGACCAGTTAAAGAACAAAATCAAGAGGTTGAAACAGAAATACCAAAGCATTGCAGAAAAGGGTAAAAATGGTGAAACCCCTGTTCTCGGCAAGCCACATGACTACAGGCTTTTCGATCTATCCAAGAAAATTTGGGAAGCTTCTGTGACCAATGGGGTGGAAGGTAGTGCTAAGAAAAAGAGAAAACCAAAGCCAACTCAGAAGCCAACTCAGAGCGAACCCAAGACTTCTGCTTCAGCATTAACAAATGGTGAGACTAATGCTGAACCGTCAAGGCCTAATTCGTCATTCTGTGATGCCTTATTGGTACAAGGGAAGCTTTTGTCGATACCAGAGGGTGCTGCAAACTTTATGAAGGAAGCTCTGCCATTGATGGGGAGTGCGAAGACAAGGGAATTGGAAAGCAAGTGGAGGAAGTTGCAGGAAGATGAATTCAAATTGTATTTGAAGAAGGTTGAGTTGGTTCGTGACTCTGCTAAACTGATGTTAGAAGCGATGAAATCATCCACATCTTAG 1155 0.4571 MAAKRLLEDPPPASSSEEDEETEDDAAEEDNGDSEELEDEQDEGSHQNNKAKSNDDSVTKSLKDSKDQSSSESGDESGSETESDDTRPSPTASAFTIKPIASKPMKDSVQPQKNSGSRKLALSPVKTDTGGVKRSRESDGVERKESKKNKVPNVQDEDLKRGSGVPRLWSEDDEVAILKGMIEYQSEKGTDPWADMEAFLGFIKENLHVDVSKDQLKNKIKRLKQKYQSIAEKGKNGETPVLGKPHDYRLFDLSKKIWEASVTNGVEGSAKKKRKPKPTQKPTQSEPKTSASALTNGETNAEPSRPNSSFCDALLVQGKLLSIPEGAANFMKEALPLMGSAKTRELESKWRKLQEDEFKLYLKKVELVRDSAKLMLEAMKSSTS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0610 384 MobiDBLite consensus disorder prediction 107 122 - -
Alju10g0610 384 MobiDBLite consensus disorder prediction 130 166 - -
Alju10g0610 384 MobiDBLite consensus disorder prediction 1 166 - -
Alju10g0610 384 MobiDBLite consensus disorder prediction 56 73 - -
Alju10g0610 384 Pfam Protein of unknown function, DUF573 166 259 IPR007592 GO:0006355
Alju10g0610 384 MobiDBLite consensus disorder prediction 264 309 - -
Alju10g0610 384 PANTHER BNAANNG10740D PROTEIN-RELATED 10 378 IPR007592 GO:0006355
Alju10g0610 384 MobiDBLite consensus disorder prediction 13 42 - -
Alju10g0610 384 Coils Coil 213 233 - -
Alju10g0610 384 MobiDBLite consensus disorder prediction 282 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0610 Alju-ChrAlju10 5035946 5037100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0610 7 381 GeBP Transcription Factor Family AT1G61730 29.231 2.14e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Alju10g0610 DUF573 1.8e-31 CL0123