Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0597 ATGGAACCTCTATGTGAACTTTGTGGGGCGGTAAGAGCAGTAGTGTACTGCAAGCCAGATTCTGCTCGTCTCTGTTTGAATTGCGATGATCGTGTACACTCTGCAAATGCTCTGTCACGCCGTCATCCTCGTTCACTCCTATGTAAAAAGTGCAACTCTCAGCCTGCAATTGGCCGCTGCATGTTTGATGAAATGTCTGTGTGTCAATCTTGTGACTTGGACCCATATGGCTGTTCAAGTTTGGGCCATAGGTGTCAGGTATTGAGTTCTTACACTGGTTGTCCCTCTCCGGTCGAGTTCTCAAAAATATGGTCCTTTGCTGTTGCTCCTTCGTCTGGTGGTTTTGGTGTCACCAGTTCTCGATCATTTGACACATTTCTTCCTAGAAATGACAACTGCTCCAGCAAGCGTTTGGAGCAACCAGATGATGACGATGCCTCCTCTGGTTTGGTGACAGGTAAGGTGAATGAAATAGAACCATGTGTCAAATATGATCCTTGGACGGGACAATCTTCTAATTTTGTACTGCCAAACACAAATTTCTTGTCATCATGCAAAGATCAACCTTTTTCATTTCCTCTTGATTCATATCTGTCAAAGGGATATCCTAATTTAAAGGATCTTGGGTCTGTTAGTGGTGATGATCTCTGTGGAGGTCTCAACATACAAAATATTTCATTATGTTTTGAAGGTGATGATGAAATAGTTGATTACACTAAAGAAGCCACCAGATACCATCTTGAGAATGGAGAAATTGACTATTCATTAATGGAAAAGAGCGTATCAGTGCCAAAACCCGACGGTCTTATTGAGAATGCCTCAGAGGCATCTTCATTATCAGTTCAACAGGATTTTGTAGCCTTTCAATCATCCAGTCCTGGCGAGTCAGTTAACTTGGATCACAGCATCAACAGTAATGCAAATCCTATACCCAAGAATCTGGGCTGCAACCAAAATGTCAATCTAGGATATCCTCATGGTCAAGCGCATCCAAGCATGTCAGTCTCATTATCAAACATTAGTGGTGAAATTAGTAACCCTGTCCCTGATCATCAAGATTGTGGATTACCACCAGCATTCTTGGCAGGTGTTAGTCAACCAAATTTTGGGTCTCTGTGCCCACAGGCAAGGGACAAGGCTAAAAAGAGATACAACGAGAAAAAGGAAAAAAGGAAGTTTAATAAACAAATAAGATATGCATCTCGCAAGGCAAGAGCTGATACTAGAAGACGGGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCTTACGATTATGATCCTCAGGTCAATGGGAACACCCAAGCAGATTGCCGGCAATCACAGACCTTTCTCTTGTTGTGTGATTCAGATTGGTAA 1356 0.4248 MEPLCELCGAVRAVVYCKPDSARLCLNCDDRVHSANALSRRHPRSLLCKKCNSQPAIGRCMFDEMSVCQSCDLDPYGCSSLGHRCQVLSSYTGCPSPVEFSKIWSFAVAPSSGGFGVTSSRSFDTFLPRNDNCSSKRLEQPDDDDASSGLVTGKVNEIEPCVKYDPWTGQSSNFVLPNTNFLSSCKDQPFSFPLDSYLSKGYPNLKDLGSVSGDDLCGGLNIQNISLCFEGDDEIVDYTKEATRYHLENGEIDYSLMEKSVSVPKPDGLIENASEASSLSVQQDFVAFQSSSPGESVNLDHSINSNANPIPKNLGCNQNVNLGYPHGQAHPSMSVSLSNISGEISNPVPDHQDCGLPPAFLAGVSQPNFGSLCPQARDKAKKRYNEKKEKRKFNKQIRYASRKARADTRRRVKGRFVKAGEAYDYDPQVNGNTQADCRQSQTFLLLCDSDW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0597 451 ProSiteProfiles CCT domain profile. 377 419 IPR010402 GO:0005515
Alju10g0597 451 Pfam CCT motif 377 419 IPR010402 GO:0005515
Alju10g0597 451 CDD Bbox1_BBX-like 4 47 - -
Alju10g0597 451 SMART bboxneu5 1 47 IPR000315 GO:0008270
Alju10g0597 451 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju10g0597 451 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0597 Alju-ChrAlju10 4951835 4953780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0597 1 427 C2C2-CO-like Transcription Factor Family AT3G21880 38.515 3.77e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Alju10g0597 CCT 1.2e-14 CL0281