Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0567 ATGCAGGGGATGATGATTCACAGTGACGAAGAATTTAGGGACGAGGTTGAGGACGAGACGGCGGCGGCGGCGGCATACGGTGGTGAGGCAAAGCAGAGCATGAAGAAGGGGCCGTGGACGGCGGCGGAGGACGCGATATTGATAGAGTACGTGAACAAGTACGGGGAGGGGAATTGGAATTCGGTGCAGAAGAACTGTGGGTTGACGAGGTGTGGCAAAAGTTGCAGGCTCCGATGGGCCAATCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTCAAGAAGAAGAACACCTCATCGTCCACCTTCACGCCAAGCTCGGCAACAAATGGGCTCGCATGGCTTCCCTGTTACCAGGGAGAACTGATAATGAAATAAAGAATTTCTGGAACACGAGAATGAAAAGACGCCAGCGAGCTGGGTTGCCTCCCTATCCTCCCGAACTTGAAGAAGAAGCCTCTGTGCATCAACTTCACCAAAATCAGCAATACCATAATGCACTGCCACCTCACCATTCTTCTTTCTCATTTTCTTCTCTCCTATATTCTCCCTCCAACACACCCCATAACCTCAATGGCCATCTGTACAGTTCGGATGATTCTGATTCAACTTATGACATGGGCCTCCCGTTACTACCCACCGCCGTTTATCTGAATGGGTTTAATTATTCCGGTGGTGGTACGATGACAGAGATCTCTTCAACCCTATCGGAAACACCTCCTTCATCCTACAGTACTGGTGGTGGTGGTCTTCATGGCTTGATGGGAGGTTCCACCGTTGGTCCTGGTGGTGTTGACTACCATGAAGTTGCACCATTGTCATCATCAACTGAAGAAAACAGTGGGCTCTTGGAAGCTGTACTTATGGAGTCTCAAGCCCTTTCTCGCAGTGACAAACGCAAGTGTAAAAGTAATGATTCTTCTGCAGGAAGGAAACGCATTATCTCCAAGCGGAAACGTATTGCAGAAGAGAAGAAAGACAAAGACATTAATAATGAACAATTGGAGTCAGATGGGAAGAATAGTAATCATGGTGAATTCCAGAGGGATGATCTAAGCTTTTCTCAACTATCAGCAGAGAAGAAGGCATCATCATCGGTTAGGGTTAATAATGATCCAACGGAGGAGATGAGTTCGATGGACGATGACTTGTTTAGCTTGCTGAACAATTTTCCGTCAGAAATGCCGGTGCCTGAGTGGTACCGAAGAGGAGAAAGACAAGCAGTGGAAGTTGAAAATCAACAAAATGATTCATTGGGCCAACCTGATCAACAACTTGCTTGGACCCTCGGAACCTGCTGGTCCAACGACTTGCCAAGTATATGCTAA 1329 0.4755 MQGMMIHSDEEFRDEVEDETAAAAAYGGEAKQSMKKGPWTAAEDAILIEYVNKYGEGNWNSVQKNCGLTRCGKSCRLRWANHLRPNLKKGAFSQEEEHLIVHLHAKLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGLPPYPPELEEEASVHQLHQNQQYHNALPPHHSSFSFSSLLYSPSNTPHNLNGHLYSSDDSDSTYDMGLPLLPTAVYLNGFNYSGGGTMTEISSTLSETPPSSYSTGGGGLHGLMGGSTVGPGGVDYHEVAPLSSSTEENSGLLEAVLMESQALSRSDKRKCKSNDSSAGRKRIISKRKRIAEEKKDKDINNEQLESDGKNSNHGEFQRDDLSFSQLSAEKKASSSVRVNNDPTEEMSSMDDDLFSLLNNFPSEMPVPEWYRRGERQAVEVENQQNDSLGQPDQQLAWTLGTCWSNDLPSIC 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0567 442 SUPERFAMILY Homeodomain-like 33 130 IPR009057 -
Alju10g0567 442 MobiDBLite consensus disorder prediction 320 347 - -
Alju10g0567 442 Coils Coil 318 338 - -
Alju10g0567 442 CDD SANT 91 132 IPR001005 -
Alju10g0567 442 Gene3D - 91 172 - -
Alju10g0567 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 83 IPR017930 -
Alju10g0567 442 FunFam Transcription factor GAMYB 91 137 - -
Alju10g0567 442 Pfam Myb-like DNA-binding domain 39 98 - -
Alju10g0567 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Alju10g0567 442 MobiDBLite consensus disorder prediction 348 374 - -
Alju10g0567 442 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Alju10g0567 442 MobiDBLite consensus disorder prediction 233 257 - -
Alju10g0567 442 Gene3D - 35 88 - -
Alju10g0567 442 MobiDBLite consensus disorder prediction 294 378 - -
Alju10g0567 442 CDD SANT 38 83 IPR001005 -
Alju10g0567 442 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 22 416 - -
Alju10g0567 442 MobiDBLite consensus disorder prediction 294 312 - -
Alju10g0567 442 SMART sant 88 136 IPR001005 -
Alju10g0567 442 SMART sant 35 85 IPR001005 -
Alju10g0567 442 ProSiteProfiles Myb-like domain profile. 31 83 IPR001005 -
Alju10g0567 442 FunFam MYB-related transcription factor 35 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0567 Alju-ChrAlju10 4648420 4650931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0567 14 164 MYB Transcription Factor Family AT5G06100 67.308 2.23e-67 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0567 Myb_DNA-bind_6 5.5e-15 CL0123