Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0558 ATGGATTGGATCAAAGGCCACACCTTAGGCTACGGCTCCTCCGCCACCGTCTCTCTCGCCTCCTCCTCCGGCTCTGACCTCGTCTTAGCAGTCAAGTCATCAGAGCTCTCTCGCTCTCTGTTCTTACAGAGAGAACAGAGTATCCTATCTACTCTGTCCTCTCCTTATATTGTTGCCTATAAAGGGTGTGATGTTACTAGAGAGAACAACAAGCTCTTTTACAATCTCTTCATGGAGTACATGCCATTTGGTACTGTTATTCAGGCGACTCAACGGCACGATGGCCGCCTCGACTTGGGGGTGGTAGGGTTTTACACTTGGCAGATTTTGCAGGGGCTGGAGTATTTACATTCCAACGGGTTGGTACATTGTGACATTAAGAGCACCAACATATTGACTGGTGAAGATGGAGCCAAGATTTCGGATTTTGGGTGTGCCAAGCAGGTTGATGACATGGCGGCGCCGATCAGCGGGACGCCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAAGAACAGGGGTGTGCTGGTGATATTTGGGCACTTGGGTGCACAGTGATCGAAATGGCTTCTGGGGTTTCGCCGTGGCCGAACATGGCGGACCCTTTCTCGGTTCTTCACCGGATCGCATATTCGGGCGAGACGCCGGAGATTCCAGGATTTCTATCGGATGAAGCAAAGGATTTCTTAGACAAGTGCTTGAAGAGGGATCCGACAGAGAGATGGACGGCTACTCGATTGTTAAAGCACCCATTCGTTACGGAATTCAATTCGAAATCCATGGAGAAGGAAATTCAAAAACTCAATTCGAGTTCACCCACATGCGTACTTGAGCAGGGGTTTTGGAATTCCATGGACGAATCGGAAACTCAGGGAAATTTGATTCGCACCAGGTTCGAAAATTCGGGAGCTGATGATAGAATCAGAAGGTTAGCTGAGTTCTCAGGAGAACCCACATGGACACGTGATGATGATAATTGGATCACAATCAGAGGAGCCGATGATGAAGCATCAGCTTCAACCAGCGACGATGGTTCGGAAGAGTCCGTGATCAAAAGCAACGTTAGAAGTAGAATTAGTGGGTGTTTTAGCGGAAATTACGAATTTAGTGAAATTAGTGATATGATTAGTACTCATTACAATTTTGAGAGAGGCAGTGTGAATAGGATGACGCTACAGCCTCCCATGTCATTTTATTCATGA 1203 0.4813 MDWIKGHTLGYGSSATVSLASSSGSDLVLAVKSSELSRSLFLQREQSILSTLSSPYIVAYKGCDVTRENNKLFYNLFMEYMPFGTVIQATQRHDGRLDLGVVGFYTWQILQGLEYLHSNGLVHCDIKSTNILTGEDGAKISDFGCAKQVDDMAAPISGTPMFMAPEVARGEEQGCAGDIWALGCTVIEMASGVSPWPNMADPFSVLHRIAYSGETPEIPGFLSDEAKDFLDKCLKRDPTERWTATRLLKHPFVTEFNSKSMEKEIQKLNSSSPTCVLEQGFWNSMDESETQGNLIRTRFENSGADDRIRRLAEFSGEPTWTRDDDNWITIRGADDEASASTSDDGSEESVIKSNVRSRISGCFSGNYEFSEISDMISTHYNFERGSVNRMTLQPPMSFYS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0558 400 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0558 400 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Alju10g0558 400 FunFam Mitogen-activated protein kinase kinase kinase 17 2 307 - -
Alju10g0558 400 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0558 400 Gene3D Transferase(Phosphotransferase) domain 1 2 310 - -
Alju10g0558 400 CDD STKc_MAPKKK 2 253 - -
Alju10g0558 400 SUPERFAMILY Protein kinase-like (PK-like) 3 265 IPR011009 -
Alju10g0558 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Alju10g0558 400 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 308 - -
Alju10g0558 400 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0558 Alju-ChrAlju10 4540829 4542031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0558 1 285 MAP Kinase Kinase Kinase AT2G32510 55.137 1.32e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju10g0558 Pkinase 2.6e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0391 02 2941188 2943513 Alju10g0558 10 4540829 4542031 CCT
Alju10g0558 10 4540829 4542031 Alju10g0558 10 4540829 4542031 ECH