Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0556 ATGGCCGGAGGGGTTGGACTCTCCATTGTTTCAGATCCACCTGTTAAAGCCTTCTTCTTCTCCTACCCCCATTGTTCTCCAAGACGACAACCTCCCATGGACTCTAATTTCCCTGTAGAAATGGACTTCTTCTCTAACAACAACAACAACAATCTCAAGCCTCCCTCTGCCTCTTCCAGCGATGATTCCTCTACCCCTCTTCCTCATCGTCTTGATTTCAAACTCAATACTGGTCTCAATCTCTTGACTACTAACGGCGACCAATCCCTGGTGGACGGTGCGTTTGACATGTATTCTGTTTTCAAAGACAAACGAGCCAAGGCTAGTGAGGTCAGATTTCCAGATGTAACATTGCAGACTGAGATTGCTGTTCTTCGAGCTCAGTTAGAAAATATGACGAGAGAGAATCATAAGCTTAAAGACACGCTTGAGAAGGTTAACACAGATTACAATGACCTAAAAATGCAGGTAGAGTTAATCATGTCTCGCAATAAGGGCAGCGAGGAGGCTGACGAGGAACCTGAAAACGAAGGGCTTGGTGGGGCAAGTGGATCAGAAGAAAAGAAACAGAGAGAGAGTAATAGAGGAAGCTTAGTGCCAAGGCAATTTATAGATCTTGGATTAGCTTCCATCAATGATGGTGAGGCTAATAATAGTGATGAGCCTTCGCTTTCTTCGCCCAAAAGAAGAAGCAGTGAGAGATCAAGATCACCATTGGAAGTGGAATGTAGGGCCAAAATTGGTTCTGATAAGAAGGAACTGATCAACAAAGGAAATGGAAGTGAAGAAGAAGCCGATCAGAAGACCCAAAAGTATAGTCCTCCGAGGAACATTGATGAACAGGTGGAAGCCACTATGAGGAAGGCAAGGGTTGCAATTAGATCTCGATCAGAAACACCTATGATTAGTGACGGATGTCAATGGAGAAAATATGGGCAGAAGATGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGCCGAAGGTTGTCCCGTTAAGAAACAGGTGCAAAGGTGTGCTGAGGATAGAACAATCTTGGTAACAACATATGAAGGAACTCATAATCACGCATTGCCTCCAGCAGCAATGGCGATGGCACAAACAACAGCAGCAGCAACAAGGATGTTTCTTTCAGGATCAATGTCAAGCAATGATGGTCTAATGAATGGAAGCTTCTTGACAGGGACGACATTGCTTCCTTATTCTTCGAGTAACATGGCAACTCTGTCGGCCTCAGCTCCATTTCCAACTATTACGTTGGATTTAACTAATCCTCCAACGACACAACCACCTTCTACCCAATTTCAAACGCCTTTCTCAAATAATGCCTCTCACGGTTTCACTCAATTTTTGGCTCAAGCTCTTTGTAACAACAATCAATCAAGGTTTTCAGGCCTTCATACCAGTAACAAAGACCCATTGCAATTGAGTGCTGCCATAGCAGCTAACCCTAACTTCACTGCAGCTTTGACGGCGGCTATCACTTCTATCATCGGTTCTGCCCTGCCAAAGAATGTCAACAATGACAATAATGTCAATGACCACAACAATGATTCTAATTTTTCAGGGAACTAG 1587 0.4423 MAGGVGLSIVSDPPVKAFFFSYPHCSPRRQPPMDSNFPVEMDFFSNNNNNNLKPPSASSSDDSSTPLPHRLDFKLNTGLNLLTTNGDQSLVDGAFDMYSVFKDKRAKASEVRFPDVTLQTEIAVLRAQLENMTRENHKLKDTLEKVNTDYNDLKMQVELIMSRNKGSEEADEEPENEGLGGASGSEEKKQRESNRGSLVPRQFIDLGLASINDGEANNSDEPSLSSPKRRSSERSRSPLEVECRAKIGSDKKELINKGNGSEEEADQKTQKYSPPRNIDEQVEATMRKARVAIRSRSETPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAEGCPVKKQVQRCAEDRTILVTTYEGTHNHALPPAAMAMAQTTAAATRMFLSGSMSSNDGLMNGSFLTGTTLLPYSSSNMATLSASAPFPTITLDLTNPPTTQPPSTQFQTPFSNNASHGFTQFLAQALCNNNQSRFSGLHTSNKDPLQLSAAIAANPNFTAALTAAITSIIGSALPKNVNNDNNVNDHNNDSNFSGN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0556 528 ProSiteProfiles WRKY domain profile. 297 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0556 528 Gene3D WRKY domain 287 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0556 528 Pfam WRKY DNA -binding domain 304 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0556 528 SMART WRKY_cls 302 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0556 528 MobiDBLite consensus disorder prediction 39 68 - -
Alju10g0556 528 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 118 518 IPR044810 GO:0003700
Alju10g0556 528 MobiDBLite consensus disorder prediction 507 528 - -
Alju10g0556 528 MobiDBLite consensus disorder prediction 226 270 - -
Alju10g0556 528 Coils Coil 122 156 - -
Alju10g0556 528 MobiDBLite consensus disorder prediction 164 274 - -
Alju10g0556 528 SUPERFAMILY WRKY DNA-binding domain 295 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0556 528 MobiDBLite consensus disorder prediction 40 66 - -
Alju10g0556 528 FunFam probable WRKY transcription factor 31 287 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0556 Alju-ChrAlju10 4520169 4522097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0556 119 502 WRKY Transcription Factor Family AT4G04450 47.482 6.40e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju10g0556 WRKY 5.2e-24 CL0274