Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0555 ATGGCTGCGAGAAGCTTCTTCCTCTGCAATCCCATTGTTCTCAACTCTTTCCCTCTTGAAGACAATCTTCAACCTCCCATGGACTCTAATTCCCTCTCTTTCCCTCCAGAGATGGACTTCTTCTCCAACAACGATCTCAAGCCTCCCTCTGCCTCTTCCAGCGATGATTCCTCTACCCCTCCTCATCCTCTCGATTTCAAACTCAACACTGGTCTCAATCTCTTGACTAATAGTGGCGACCATTCCGAGGTGGAAGATACGTTTGGCATCTATTACAATATTAAAGAGAAACAAGCCAAAACTGGTGAGCTGGAAACAGAGATTGCTGTTCTTCGAGCTGAGTTAGAGAAGATGATGGGAGAGAATCATAAGCTGAAAGACACGCTAAATAAAGTTAACACCAATTACAATGCCCTGAAGATGCACATAGACTTTCTCGAGTCTTCTCGAAAGGGCAGTGAGGACGCTGAGAAACCTGAAAACCAGGTGCCTAATGCAAGTCCAGAAGAAAAGAAAGAAACAGAGATTAACAGAGGAACCTTAGTGCCAAGGAAATTTTTAGATCTTGGATTAGCTTCCATCAATGATGGTGAGGCTAAAAGTGTTGAGCCTTCGCTTTCTTCGTCTGTAAGGAGAAGCAATGAGAGATCAAGATCGCCCTTGGAAGTGGAATGTAGCGCCAAAATTGGTTCTGATGAGAAGGAATTCAAAAGAGAAAATGAAATTGAAGAGGAAGCTGACAAGACTCAAAAGTATAGTCCACCCAGAAACGTTGATGATCAAGTGGAAGCCACTATGAGAAAGGCAAGAGTTTCAGTCAGAGCTCGATCAGAAGGACCTATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAAAAGATGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGCTGCAGGTTGTCCCGTTAGGAAACAGGTACAAAGGTGTGCAGAGGATCGAACAATCTTGGTGACAACGTATGAAGGAAACCATAACCATGCATTGCCTCCAGCTGCGATGGCGATGGCACAAACAACATCAGCAGCAGCAAGGTCATTGCTTTCAGGATCAATGTCAAGCAATGATCGTCTGATTCCTTATTCTTCAAGTAACATGGCAACTCTATCGGCTTCGGCTCCATTTCCAACTATTACGTTAGACTTAACTATTCCTCCAACAATACAACCTTCTACCCAATTTCAAATGCCTTTTTCAAATGCTGGTTTCACTCCTCATCATTTCACTCAGGGTTTGACTCAAGCGCTTTGTAAGAGCAATCAATCAACTTTTGCTGGGCTTCAAATGATGAATAACAAAGACCCTTTGCAATTGAGTGCTGCAATAGCAGCTGACCCTAACTTCACTGCAGCTTTAACGGCGGCTATTACTTCCATTGTGGGTTCTGCTCTGCCAAAGAATGTTAACGCTGTCGTCAATAATGGCAGTAGTGTTACATCCGGCAACAATAATGGTTCAAAATTTTCAGGAAACTAG 1515 0.4363 MAARSFFLCNPIVLNSFPLEDNLQPPMDSNSLSFPPEMDFFSNNDLKPPSASSSDDSSTPPHPLDFKLNTGLNLLTNSGDHSEVEDTFGIYYNIKEKQAKTGELETEIAVLRAELEKMMGENHKLKDTLNKVNTNYNALKMHIDFLESSRKGSEDAEKPENQVPNASPEEKKETEINRGTLVPRKFLDLGLASINDGEAKSVEPSLSSSVRRSNERSRSPLEVECSAKIGSDEKEFKRENEIEEEADKTQKYSPPRNVDDQVEATMRKARVSVRARSEGPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQTTSAAARSLLSGSMSSNDRLIPYSSSNMATLSASAPFPTITLDLTIPPTIQPSTQFQMPFSNAGFTPHHFTQGLTQALCKSNQSTFAGLQMMNNKDPLQLSAAIAADPNFTAALTAAITSIVGSALPKNVNAVVNNGSSVTSGNNNGSKFSGN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0555 504 MobiDBLite consensus disorder prediction 215 254 - -
Alju10g0555 504 Gene3D WRKY domain 267 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0555 504 SMART WRKY_cls 282 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0555 504 MobiDBLite consensus disorder prediction 199 258 - -
Alju10g0555 504 SUPERFAMILY WRKY DNA-binding domain 276 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0555 504 MobiDBLite consensus disorder prediction 28 65 - -
Alju10g0555 504 Coils Coil 94 135 - -
Alju10g0555 504 ProSiteProfiles WRKY domain profile. 277 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0555 504 MobiDBLite consensus disorder prediction 150 179 - -
Alju10g0555 504 MobiDBLite consensus disorder prediction 200 214 - -
Alju10g0555 504 Pfam WRKY DNA -binding domain 284 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0555 504 MobiDBLite consensus disorder prediction 45 65 - -
Alju10g0555 504 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 86 482 IPR044810 GO:0003700
Alju10g0555 504 FunFam probable WRKY transcription factor 31 267 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0555 Alju-ChrAlju10 4514505 4516413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0555 30 473 WRKY Transcription Factor Family AT1G62300 44.000 8.43e-96 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju10g0555 WRKY 5.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0390 02 2934138 2935497 Alju10g0555 10 4514505 4516413 CCT
Alju10g0555 10 4514505 4516413 Alju10g0555 10 4514505 4516413 ECH