Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0540 ATGTCATCTATTGCTTCCGATCATCCTTCTCCTTATGTAGTGAACGATTGTCGCGGCGTCCTTCAAGTTTACAGCGACGGTTCCATCGTACGCTCTTCAAAGCCAAGCTTCAACGTTACTGTCCACGACGACGGCTCTGTTTTGTGGAAGGATGTCGTTTTCAACCCGACCCACAACCTTCAGCTTCGTCTCTATAAGCCCGCTGATTCGTCTTCCTCCTCCAGGCTTCCCATTTTCTACTATATCCACGGCGGTGGCTTCTGCATCGGCTCCTTCACCTGGCCCAACTTTCACAACTACTGCCTCCGCCTCGCTTCGGATCTCCGAGCTGTCATAATCGCGCCGGACTATCGGCTTGCTCCGGAGAACCGACTCCCAGACGCTATGGATGACGCCTTCGTGGCCGTCAAGTGGCTCCAGGCTCAAGCCACTAGCGATAACCCGGATCCGTGGCTGACCGAAGTGTGCGATTTCAGTCGGGTGTTCATTTCGGGCGACTCCGCCGGCGGAAACCTTGCTCACTATCTAGCGGTTCGGCTGGGCCGTGGGTCGCTCGAGTTGGCGCCTGTTCGGATCAGAGGTTACATCCTTTTGGCGCCCTTCTTTGGCGGCATCGTCAGAACCAAACTGGAGGCTGAAGGTCCAAAGGACGCTTTCCTCAATTTAGAACTCATGGACAGATTTTGGAGGCTCTCTGTACCGATCGGAGCCGACAGGGACCATCACCTTGTGAATCCATTTGGGCCATCGAGCAAGAGCCTTGAAGGAATTGATCTGGATACAATGCTAGTGGTGGTTGGAGGAAGTGATTTGCTGAGAGATAGGTGTAAGGATTATGCAGATAGGCTTAAGAATTGGGGGAAGAACATAGAGTATGCAGAATTTGAAGGAAAGCAACATGGATTCTTCACTGTTGATCCTAATTCAGAAGCTGCAAATGAGTTGATGCTAATCATCAAACAATTCGTAGAGAAACACTCATTCTGA 987 0.5137 MSSIASDHPSPYVVNDCRGVLQVYSDGSIVRSSKPSFNVTVHDDGSVLWKDVVFNPTHNLQLRLYKPADSSSSSRLPIFYYIHGGGFCIGSFTWPNFHNYCLRLASDLRAVIIAPDYRLAPENRLPDAMDDAFVAVKWLQAQATSDNPDPWLTEVCDFSRVFISGDSAGGNLAHYLAVRLGRGSLELAPVRIRGYILLAPFFGGIVRTKLEAEGPKDAFLNLELMDRFWRLSVPIGADRDHHLVNPFGPSSKSLEGIDLDTMLVVVGGSDLLRDRCKDYADRLKNWGKNIEYAEFEGKQHGFFTVDPNSEAANELMLIIKQFVEKHSF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0540 328 Gene3D alpha/beta hydrolase 19 327 IPR029058 -
Alju10g0540 328 PANTHER ARYLACETAMIDE DEACETYLASE 19 305 - -
Alju10g0540 328 SUPERFAMILY alpha/beta-Hydrolases 9 326 IPR029058 -
Alju10g0540 328 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 161 173 IPR033140 -
Alju10g0540 328 Pfam alpha/beta hydrolase fold 80 303 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0540 Alju-ChrAlju10 4415607 4416684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0540 13 324 Carbohydrate Esterase AT5G16080 34.783 2.06e-57 187