Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0538 ATGTACAACGCTATGATGGATCCTGAGATGATCAGAATCGCTCAGGAGCAGATGAGTCGCATGTCGCCCGCGGAGTTTGCTCGAATCCAACAACAGATGATGTCTAATCCAGAGTTAATGAGGATGGCTTCAGAAAGCATGAAGAACATGAGGCCTGAAGACTTCAAACTTGCTGCAGAGCAGTTAAAGCATACTCGTCCTGAACAGATGGCTGAGATTGGTGAGAAGATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGGGCTGATGCGCAGATGAAATATGAAATAAGTGGAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCACAGTCAGGGTAGATTCCATGAAGCTATGCAGAAGTATTGTCTTGCCAAGCAAAACCTTGGAGAAATTCCATCCTCCCAAAGTAGAAAGCTTCTTTTAGCATGCTCGCTCAACTTGATGTCTTGTTACCTGAAGACAGGGCAGTATGATGAATGTGTAAAGGAAGGTTCTGAGGTTTTGGCTTATGATGCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCGTATAAGGAACTTGGTTTACTAAAGGATGCTGTTAATGATTTGAGCATGGCATGTGAAGTTTGCCCTGATGATGATACAGTTTCAAAGCTTTTAAGGGAGACCAAGGAAATGTTGGCAGAGGATGGTGGCGAGCGTGCACCTAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTTCCGGCACAAAACTCTGGAAGCTCATCTGTTGAGCAAACAGTGGCTAAGCCGAAAGCTTCCAATACTTCTTCTAAGAGTTCCAGTACAGTCATCAATGGCGATTTAAAATCAAATGTGGAAGGTTTAAATGCATTGAAAAATGATCCTGAAGCTATCAGATCATTTCAAAATTTCATTTCAAATGCCGACCCTGCCACTCTTACTTCTTTGAATGGTGGACAATCCAAAGATATGTCTCCTGATATGATTAGAACTGCCTCAAACATGATTAGCAAGATGTCACCACAGGAGCTTCAAAAAATGCTAGACATGGCTTCCTCGTATCAGGGGGACAACCCATTTTTAAGGGTTTCCCCTAATTCTACTATCAATTCTGGATCAATTCCTCCAAATGTGACTCCTGACATGTTTAAAACAGCTTCTGATATGATAAGTAAAATGCCACCAGAGGATCTTCAAAAGATGTTTGAAATGGCTTCCTCAATGTCTGGGAAAGCATCTAGTTCATCGTCTGCTGCTGTTGACGAGAATGTGAGAAATGCTTCTCAGTCAGATTTCCCCTCCTCGAATGCTAATGGAAGTAATGCTTTTGCTGAATCAAATTCATCTCATGATTCGTTTTTAAATATGAGAAATGCTGCTCAGTCAAACTTCCCGTCCTCAAGTACTGATTTGCAAGAGCAGATGAGAAACCAGATGAAAGATCCAGCCATGCGACAGATGTTCACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGGGAACAATTTGGTGTCAAGGTTTCAAAAGAAGATGCAGCGAAGGCTCATCAAGCCATGTCATCCTTGTCAACAGAGGATTTGGATAGAATGATGCGATGGGCTGATCGGGTTCAGAGAGGAGTTGAAGGTGCAAAGAAGACAAAGAATTGGCTACTTGGAAAACCTGGTCTGATATTGGCAATAGTGATGCTCATTTTAGCAGTAATACTTCACCGGCTGGGTTTCATCGGTGTCTAG 1764 0.4212 MYNAMMDPEMIRIAQEQMSRMSPAEFARIQQQMMSNPELMRMASESMKNMRPEDFKLAAEQLKHTRPEQMAEIGEKMANATPEEIAAMRARADAQMKYEISGAEMLKKQGNELHSQGRFHEAMQKYCLAKQNLGEIPSSQSRKLLLACSLNLMSCYLKTGQYDECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVNDLSMACEVCPDDDTVSKLLRETKEMLAEDGGERAPRGLVIEEITEEDQNVPAQNSGSSSVEQTVAKPKASNTSSKSSSTVINGDLKSNVEGLNALKNDPEAIRSFQNFISNADPATLTSLNGGQSKDMSPDMIRTASNMISKMSPQELQKMLDMASSYQGDNPFLRVSPNSTINSGSIPPNVTPDMFKTASDMISKMPPEDLQKMFEMASSMSGKASSSSSAAVDENVRNASQSDFPSSNANGSNAFAESNSSHDSFLNMRNAAQSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGVKVSKEDAAKAHQAMSSLSTEDLDRMMRWADRVQRGVEGAKKTKNWLLGKPGLILAIVMLILAVILHRLGFIGV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0538 587 Gene3D Tetratricopeptide repeat domain 89 234 IPR011990 GO:0005515
Alju10g0538 587 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 377 - -
Alju10g0538 587 MobiDBLite consensus disorder prediction 432 454 - -
Alju10g0538 587 MobiDBLite consensus disorder prediction 248 284 - -
Alju10g0538 587 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Alju10g0538 587 MobiDBLite consensus disorder prediction 247 284 - -
Alju10g0538 587 SUPERFAMILY TPR-like 101 226 IPR011990 GO:0005515
Alju10g0538 587 SMART tpr_5 146 179 IPR019734 GO:0005515
Alju10g0538 587 SMART tpr_5 103 136 IPR019734 GO:0005515
Alju10g0538 587 SMART tpr_5 180 213 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0538 Alju-ChrAlju10 4403415 4409591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0538 100 229 Calmodulin-binding Proteins AT5G48570 33.824 2.64e-13 70.9