Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0527 ATGGGTGTCCCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAATCTTCGGATAAGGATGTAAATAGGACTGGAAAAATACAACACCGAAGGAAACAATCCATTGACGTCGACAATGAAAAACTCCGAAATGAGTTTAAACATGATGCTACTCCTTTTGGAGATGCCAATATCCATTCAGTCACTGATGTCCAGCATTCACCTTCCACTTCACAACAAGTACAGGATGCTGCATATAGCCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCGCTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGCGTTCGAGCAAGGCGTGTTCGCATAGCATTGGAAAGTCAATCATCACAACAGAAGCTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTATTGAAAAGACAGGAAGCTGCAGCTAAACGAGAGAGAGCAATGGCATATGCTCTGGCGCATCAGTGGCAGGCAGCATCAAGGCAGCAGGCTGCTTCTTCTGGATTTGAACCAGACAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTCAGTGAAAATGGAGCAGTGGAGGGAAAAAATGGAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCAGTTCTGCCAGATATCAATCCAAACCTCACTAGTCAGATAACCGGGCTATCACTATCTGATGGTGGTGACTCTTCACCTAGTAAGTCTGCAGGTTTGCTGGAGGCATCAAAAACACAGATTAAGATAAAATCTAATGCCAAAGTTGAAACTGAAGAAGCCAACTCAAGACCTGGGCCTGGTTCGAGATCTCATAGTAATCCGAAGGAGAGAATCATACAAACTGATAAACAGGCCAAAAAACGATTATCTCTGCCTAACAATGCAGGGGGAAGCGGGGCTCAAACAACCAGAAATCCTGCCAGAACTAATGTGAAGGGAACAATCAGCACTCAAAAAGCCCTTCGTGACAAACCTAAGCTCAATGGAAGAGGAGGGGATGTGAATTCAACAAAAGCTGTTCCTCAACAGGCAGAAATGTAA 1302 0.4485 MGVPGKWIKALVGLKKSEKAESSDKDVNRTGKIQHRRKQSIDVDNEKLRNEFKHDATPFGDANIHSVTDVQHSPSTSQQVQDAAYSHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSSQQKLQQQLANEARVREIEEGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRQQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVSENGAVEGKNGIRSQLRSASKKSVLPDINPNLTSQITGLSLSDGGDSSPSKSAGLLEASKTQIKIKSNAKVETEEANSRPGPGSRSHSNPKERIIQTDKQAKKRLSLPNNAGGSGAQTTRNPARTNVKGTISTQKALRDKPKLNGRGGDVNSTKAVPQQAEM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0527 433 Gene3D - 93 134 - -
Alju10g0527 433 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Alju10g0527 433 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Alju10g0527 433 MobiDBLite consensus disorder prediction 282 301 - -
Alju10g0527 433 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Alju10g0527 433 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Alju10g0527 433 MobiDBLite consensus disorder prediction 17 40 - -
Alju10g0527 433 MobiDBLite consensus disorder prediction 310 433 - -
Alju10g0527 433 MobiDBLite consensus disorder prediction 310 337 - -
Alju10g0527 433 SMART iq_5 91 113 IPR000048 GO:0005515
Alju10g0527 433 SMART iq_5 114 135 IPR000048 GO:0005515
Alju10g0527 433 FunFam IQ-domain 11 91 142 - -
Alju10g0527 433 MobiDBLite consensus disorder prediction 284 301 - -
Alju10g0527 433 MobiDBLite consensus disorder prediction 381 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0527 Alju-ChrAlju10 4290905 4296585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0527 1 417 IQD Protein Family AT3G22190 57.920 7.40e-129 377