Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0518 ATGGATGAAATTGAAGTTCCTCAGTACTTCGTGTGTCCGATTTCGCTTCAGATCATGAAGGACCCTGTCACAACACTCACCGGCATAACCTACGACAGAGAAAGCATCGAACAATGGTTGCTCAAAGCTAAAGAACACAAGTGTCCTGTCACGAAGCAGACATTGCCCAGAGGCTCCGATCTCACCCCCAACCACACCCTCCGCCGTCTCATCCAGGCTTGGTGCTCAGAAAACGCCGCTCTCGGCGTCGATCGCATCCCTACCCCCAAATGCCCTCCCACCAAAACCCTCCTCCAGAAACTTCTCAGAAATCTCAATCTTCCCCATCTCTACCAATCCTCATTGGACAGATTCCATACTCTGGCCACAGAAAACCAAAGAAACCTCAAGTGCATGGCGGAATCCGGAGTGGCCGAGTCCATGATTCATCTAATTACCAACAAGTCCAACGAGTTAGGTAACAACAACACTGATTATTCCCTTGAACTTGAACAATCTCTGCAAATTCTACGCCTCCTCTGGAACAGTAGTTGCGACAACATCAAGCCTCTTGTCGTCCAGAACATCGACTTCATCAAATCGCTGGCTCGGATTCTCCATCTCCACGACGTGAACGACACCAACGTCAATCTGATAAACGAAGCAATGCCGGTGTTAAAATCCACCATCGAACTCTCAGATTCAACCCTTCTAGGAAGTTTGAAACCCGAATTCTTCATCGAAATCACAAGAATACTCAGAAACAGGTCAATCTCACAACAAGCCATGAAGTCCGCCTTGAAAATTCTCATAGAAACGTGTCCTCTAGGTAGAAACAGAACGAGGATAGTGGAAACAGGGGCAATATATGAATTGATCCAACTTGAGCTCGAGAATAATACCGAGAAGAACATAACGGAGCTTATATTTAACCTCCTTGCGCAGCTATGTTCGTGTGCGGACGGGAGGGAACAGTTCTTGTCCCACGCGGCGGGGATCGCGGTGGTGTCGAAGAGGGTTCAGAAGGTGTCTCCAGTGACGGATGATAGGGCGCTTCATGTGTTGTGGTTGGTGGCGAGGTACTCGGGGTCAAACGGCGTCGTTTTGGAGATGTTGAGGGTGGGAGCTGTATCGAAGCTTTGCATGGTGATTCAGGTCAATTGTGATCCCACTTTGAAAGAGAAAGCGAGATCAATTCTGAGGTTACATTCCAATATTTGGAATGATTCGCCTTGTATTCAAGTTTATCTGTTAACCAGGCACCAAAGGTGA 1251 0.478 MDEIEVPQYFVCPISLQIMKDPVTTLTGITYDRESIEQWLLKAKEHKCPVTKQTLPRGSDLTPNHTLRRLIQAWCSENAALGVDRIPTPKCPPTKTLLQKLLRNLNLPHLYQSSLDRFHTLATENQRNLKCMAESGVAESMIHLITNKSNELGNNNTDYSLELEQSLQILRLLWNSSCDNIKPLVVQNIDFIKSLARILHLHDVNDTNVNLINEAMPVLKSTIELSDSTLLGSLKPEFFIEITRILRNRSISQQAMKSALKILIETCPLGRNRTRIVETGAIYELIQLELENNTEKNITELIFNLLAQLCSCADGREQFLSHAAGIAVVSKRVQKVSPVTDDRALHVLWLVARYSGSNGVVLEMLRVGAVSKLCMVIQVNCDPTLKEKARSILRLHSNIWNDSPCIQVYLLTRHQR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0518 416 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Alju10g0518 416 SUPERFAMILY ARM repeat 99 394 IPR016024 -
Alju10g0518 416 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Alju10g0518 416 CDD RING-Ubox_PUB 7 55 IPR045210 -
Alju10g0518 416 PANTHER WDSAM1 PROTEIN 3 407 IPR045185 GO:0061630
Alju10g0518 416 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 82 IPR013083 -
Alju10g0518 416 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Alju10g0518 416 Gene3D - 95 408 IPR011989 -
Alju10g0518 416 SUPERFAMILY RING/U-box 3 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0518 Alju-ChrAlju10 4190595 4191845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0518 2 406 U-box Gene Family AT2G35930 42.157 2.02e-107 321