Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0506 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGGGGAGCTTTTGGAGCTGCTATTTTAGTCCATCACAAGGCTGAGAAAAAGAAATACGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGATGCAGGAGATCTGCTCATCAAGAGATGGCACTTATTGCCCGAATACAGCACCCTTACATCGTGGAATTTAAGGAGGCTTGGGTCGAGAAGGGTTGCTATGTCTGCATTGTCACGGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGAAACTCTGCAAGTGGTTTACTCAGTTACTGTTGGCAGTGGAATACTTGCATGCTAACTTTGTTTTACATCGAGACCTGAAGTGCTCCAACATCTTTCTTACCAAGGATCATGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACCTTAAAAGCAGATGATCTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTACTTGCAGATATTCCTTATGGATTTAAATCTGATATTTGGTCACTAGGGTGCTGTATATACGAGATGGCTGCTCATCGCCCCGCTTTTAAAGCTTTCGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCCATAGGTCCTTTGCCTCCCTGTTATTCCCCATCTTTGAAAACGCTGATAAAGGGTATGCTGAGAAAAAACCCTGAGCATCGACCGACAGCATCTGAGGTCTTAAAGCATCCTTATTTGCAATCTTATGTTGAACAGTATCGTCCATCTTTCAGTCCTCCGACATCCTGTTCTCCTGAAAAGCCTATTCCTGTTACCCATGATCCTCGAAGAAATATGGCTGAAAGTCAAAACAGTAGCAGTTCTAGCAGTGACAAAGATAGTTCAATGTCAAATGACAGAATCATTTCAGCAGTGGTGCTTAAGTGTGATAACAAGACCACTGAGACAGATGTAACCTCCATGGATGATGAGGATGGCTCTGAGCATATCCTGCCTGGCGAAGAAGATACTAGCTCCAGCACTAGCAATGCCAAAACTGATTGCCAGGAGGTGATGAAGCCTTCATCTAATGAACGTCAATCAATTGTTGATTCTAGGCAGCCAAAAACAATTAAAAACATAATGATGGCACTTAAAGAAGGAAAGGTTAGAGAAAATGGTTCTCCAATGAGAGGCAACCGCATTAAGGCTATTGGTGCATCAGCACAGAAAGCAAACACAGATACATTGCCTAAATTGCCCAAGTCTAATGCTCCTGGTATCAAGCCAAATTTAGAGTCTCCAACTTCAGTACCTGCAAAGACATCCCCTGATCCTCCAAAACGAATACCAAGATCTCATCCTTTAAAGAATCAGGGGCTACTGATGATGGACTCTTCACCAAAAACTAAACCCAGACATGATGGGACTCCTCCGTCTTGTCCTATTAAACAAGTTGAAGGAGATGGAGTTTCTGCCAAGGTTAGGCAAGGGACCCCCCCTAGTTTACTTAGACAACCTTCGTTTCGAGGAGGAATGAGGCAGGTTGGGCTTGATGTACGCAATGCAGCAAATGATACAGAGAAGTTTGGTCAAAAAAAAATATCGCAGGAGCCAGACAGGAGTCATTATAAGGCGCTCAATGGTCATATACCACATGCTTCTAGAGAGGTTACAGAGCCACAGAAGTCTTCTGAAAAATGTCCCAAAGGAATGCAGACCGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATGTGAACTTTCTGATGATGCCACAAATTTTATTGACATGGGAGAACAGACGCCTTCTGATCATGGGAGTGCTACACATACTGAAACTATCAAGTCACATCCAGAAAAGAGTCATTATCAGTCACCCAATGGTCACATACCACAGGCTTCTGGAGAGATTATTGAGCCTCAGAAGGCTTCTGAAAAATGTCCCAAAGGAATGCAGGCAGATAGCAGTAATTCTATTTCATCTTCAGTGTCTATTCAAGGATTTGATCTTTCTGATGATGCGACAAATTTTATTGACATGAGAGAATGGACGACTTCTGATCATGGGAGTGCAACACATATTGAAACTATAAAATCACATCCAGACAGCTGCCCACCTGCTACCCATTTGCGCTTTGAGATTGCTGAAACTGTCTCTAGGGAAGCCTCTGAACCTACCCTGAATCTTCAGCATACAATTACTAATAATGAGAGTGAAAGTTCTGGTTTAACTCTTGATTGCCATACTCCAGATTCCCATGAAATATTGGCTCCTGAATATAGTCTCCCCATCAATCAGTCAAGTACTCCTATTGCCACCTCATGTGATAGATCTCCAAGTGCCTCTGTTATGGCCAGTGGAGAAATTAAAGATCTTCAAGATACTACTAAGCAAGTGACTTCAATCCATCCTCCGAAACTTCCACTATTGAGTGCTGGAGAAAAGTTTGTTTGTGAAGAAGTCGCTCTAGTAAGTAAACCCAGTAATAGGTCTGACACAGTAAGCCAGCCAAAACCCGTGCTCGAGTCCTCTGGCGATGACAAATTCACTGTAAGAGAAAGACTGTCATCTGCGGCTGAAACTGCTCTCCCAATCACCTCTTCTAATGACCAAAAAGGTTTGCAGGAAGATAAAGGAACCATTTTGCATAATCCAGTGATTGAAAGGGCAGCTGTTGGTAATCTTCCTCCGGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGTTACCGAGTTGGGAGTGAGCAACCAGTAAAGGAATCTGTGGAGATGGGAGTTCAAAATGTGGATGTTGGTAAATTTCTCAAAGTTGTGAGGGATGATTTAGAAATGAGAAACATGGGCATCCCTATGACCCATAATTCTTCAAATTGCTCTGAAGCTGCGAGCTTGAAGTCAAACATTTCTGATCAATCAGACATGAGAAGCACGAGCACTGCTCCAGCTCTAAAACCCCCGAGTTGCTCTGATGCTTTGTGCACAAAGCCAAGCGTCCCAGATCATTCAAGTGTCAAGGAACAAAACGTGAAAAATCTTACTTCTCTAGTTTCAAAATCCGATTCCCCTGAGCTGACTAAATCTAGCTCTTCAGTGACCGAAGAGGAAACCCCAGCAAAGGAAATTCTGGATGTCAAATCATTTAGGCAGAGAGCAGATGCTCTTGAAGGGCTCTTGGAGTTGTCAGCAGAATTACTGCAGCAAAATAGATTGGAGGAGCTTGCTGTTGTTCTAAAGCCCTTTGGGAAAGATATGGTATCCCCAAGAGAGACCGCCATTTGGTTGGCTAAGAGCTTAAAGGGAATGATGAGCGATGACCATGGTGGACGTTGA 3372 0.4339 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEKLCKWFTQLLLAVEYLHANFVLHRDLKCSNIFLTKDHDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEVLKHPYLQSYVEQYRPSFSPPTSCSPEKPIPVTHDPRRNMAESQNSSSSSSDKDSSMSNDRIISAVVLKCDNKTTETDVTSMDDEDGSEHILPGEEDTSSSTSNAKTDCQEVMKPSSNERQSIVDSRQPKTIKNIMMALKEGKVRENGSPMRGNRIKAIGASAQKANTDTLPKLPKSNAPGIKPNLESPTSVPAKTSPDPPKRIPRSHPLKNQGLLMMDSSPKTKPRHDGTPPSCPIKQVEGDGVSAKVRQGTPPSLLRQPSFRGGMRQVGLDVRNAANDTEKFGQKKISQEPDRSHYKALNGHIPHASREVTEPQKSSEKCPKGMQTDSSNSVSSSVSIQGCELSDDATNFIDMGEQTPSDHGSATHTETIKSHPEKSHYQSPNGHIPQASGEIIEPQKASEKCPKGMQADSSNSISSSVSIQGFDLSDDATNFIDMREWTTSDHGSATHIETIKSHPDSCPPATHLRFEIAETVSREASEPTLNLQHTITNNESESSGLTLDCHTPDSHEILAPEYSLPINQSSTPIATSCDRSPSASVMASGEIKDLQDTTKQVTSIHPPKLPLLSAGEKFVCEEVALVSKPSNRSDTVSQPKPVLESSGDDKFTVRERLSSAAETALPITSSNDQKGLQEDKGTILHNPVIERAAVGNLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFLKVVRDDLEMRNMGIPMTHNSSNCSEAASLKSNISDQSDMRSTSTAPALKPPSCSDALCTKPSVPDHSSVKEQNVKNLTSLVSKSDSPELTKSSSSVTEEETPAKEILDVKSFRQRADALEGLLELSAELLQQNRLEELAVVLKPFGKDMVSPRETAIWLAKSLKGMMSDDHGGR 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0506 1123 MobiDBLite consensus disorder prediction 1030 1051 - -
Alju10g0506 1123 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 559 595 - -
Alju10g0506 1123 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1073 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 293 314 - -
Alju10g0506 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Alju10g0506 1123 MobiDBLite consensus disorder prediction 415 521 - -
Alju10g0506 1123 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0506 1123 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 963 998 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 655 674 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 607 646 - -
Alju10g0506 1123 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0506 1123 MobiDBLite consensus disorder prediction 963 1001 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 535 550 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 329 381 - -
Alju10g0506 1123 CDD STKc_Nek 7 262 - -
Alju10g0506 1123 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0506 1123 MobiDBLite consensus disorder prediction 531 550 - -
Alju10g0506 1123 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Alju10g0506 1123 SUPERFAMILY Protein kinase-like (PK-like) 4 318 IPR011009 -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 272 314 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 349 381 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 1030 1049 - -
Alju10g0506 1123 Gene3D Transferase(Phosphotransferase) domain 1 90 336 - -
Alju10g0506 1123 MobiDBLite consensus disorder prediction 607 622 - -
Alju10g0506 1123 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Alju10g0506 1123 MobiDBLite consensus disorder prediction 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0506 Alju-ChrAlju10 4048478 4055061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0506 14 264 MAP Kinase Kinase Kinase AT1G53570 31.641 8.54e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Alju10g0506 Pkinase 1.8e-65 CL0016