Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0477 ATGGTTTTGACTACTTCCTGGAGCAAAAGTGATCACACTAATGTGATCTTTGGCATAAACGAAGATGAAGAATTTGTTGCCTTCATAAGTATATTGGCAAATGGAGTACATGCCCTTCCGAACCGGGCTATCCTTGTAGCATATTGAGGGGTTAGACTCTCCATTGATTCAGATCCACCTGTGAAAGCCTTCTTCTCCAATAATCCCATTGTTCTTGAAGAAGACGGCCTTCAACCTCCCATGGACTCTAATTCCCTCTCTTTCCCTACAGAGATGGACTTCTTCTCTATCAACAACAATCTCAATCCTTCCTCTTCCTCTTCCAGCGATGATTCCTCTACTCATCCTCCTGACGTCAAACTCAATACTGGTCTCAATCTCTTGACTGTTAACCACGGCGGCGGCGACAATGCTTTTGACCTATATTCTAATTTTAACGAGAAACGAGCCAATATCAGTGAGTTGCAGACTGAGATCGCTGTTCTTCGACCCGAGTTAGAGAAGATGAAGAGAGAGAATCATAAGCTGAAGGAATCGCTAAATAAGGTTAATACCGATTATAATGCCCTGAAGATGCATATGGACTTTCTCCTGTCTCAAAATGGTAGTGAGGACGCTGATCAGAAACCCGAAAACAGAGTGCTTGATGCTATTCCAGAAGAAAAGAAACAAAGTGAGAAAAACAGAGGAACTTTAGTGCCAAGGCAATTTATAGATCTTGGATTAGCTTCGATTAATGATGGTGAGGCTAATAATGATGACGATGATGAGCCTTCGCTTTCTTCGTCCTTAAAGAGAAGAAATGACAGATCAAAATCACCATGTAGCACCAGAATTGATTCTGATAAGAAGGAATCCAACAAACAAACTGAAATTAAAGAAGAAGCTGACAAGAATATTATTAATCAAAAGTATAGTCCTCCCAGAAATGCTGACGTCGATCAATTGGAAGCCACTGTGAAGAAGGCACGAGTTGCAGTTAGAGTTCGATCAGAAGCATCTATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAGAAGAAGGCCAAAGGAAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGCTTCAGGTTGTCCTGTTAAGAAACAGGTGCAAAGGTGTGCAGAAGATGGAACAGTGTTGGTAACAACATATGAAGGAAGGCATAACCACGCATTGCCTCCAGCAGCAATGGCAATGGCACAAACAACAGCATCAGCAACAAGGACGTTGCTTTCAGGATCAATGACAAGCAATGATGGTCTAATGAATGGAAGCTTCTTGACAAGGACGGCACTGCTTCCTTATTCTTCAACTAACATGGCCACTCTCTCGGCCTCCGCTCCATTTCCGACTATTACCTTGGACTTAACTAATCCTCCAACAATGCAACCACCTTTTACTACCAAATTTCAAATGCCTTTATCAAATAATGCACCTCTTCATCATGATTTCACTCAGCTTTTGCCTCAAACGCTTTGTAGCAGCAATCAAACAAATTTTTCTGGGCTTCAAACGAATAACAAACACCCTTTACAGTTGAGTGCTGCTATAGCAGCTGACCCTAACTTCACTGCAGCTTTAACGGCGGCTATTACTTCTATTATGGGTTCTGCTTTGCCAAACAATGTTAACGGTAATAATAATGACAAAGTGATACGTAGGAATGACAATTATTCAAATTTTTCAGAGAATTAG 1707 0.4148 MVLTTSWSKSDHTNVIFGINEDEEFVAFISILANGVHALPNRAILVAYXGVRLSIDSDPPVKAFFSNNPIVLEEDGLQPPMDSNSLSFPTEMDFFSINNNLNPSSSSSSDDSSTHPPDVKLNTGLNLLTVNHGGGDNAFDLYSNFNEKRANISELQTEIAVLRPELEKMKRENHKLKESLNKVNTDYNALKMHMDFLLSQNGSEDADQKPENRVLDAIPEEKKQSEKNRGTLVPRQFIDLGLASINDGEANNDDDDEPSLSSSLKRRNDRSKSPCSTRIDSDKKESNKQTEIKEEADKNIINQKYSPPRNADVDQLEATVKKARVAVRVRSEASMITDGCQWRKYGQKKAKGNPCPRAYYRCTMASGCPVKKQVQRCAEDGTVLVTTYEGRHNHALPPAAMAMAQTTASATRTLLSGSMTSNDGLMNGSFLTRTALLPYSSTNMATLSASAPFPTITLDLTNPPTMQPPFTTKFQMPLSNNAPLHHDFTQLLPQTLCSSNQTNFSGLQTNNKHPLQLSAAIAADPNFTAALTAAITSIMGSALPNNVNGNNNDKVIRRNDNYSNFSEN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0477 568 Coils Coil 152 186 - -
Alju10g0477 568 Pfam WRKY DNA -binding domain 338 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0477 568 FunFam probable WRKY transcription factor 31 321 398 - -
Alju10g0477 568 MobiDBLite consensus disorder prediction 200 232 - -
Alju10g0477 568 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 150 552 IPR044810 GO:0003700
Alju10g0477 568 MobiDBLite consensus disorder prediction 544 568 - -
Alju10g0477 568 SMART WRKY_cls 336 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju10g0477 568 Gene3D WRKY domain 321 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0477 568 MobiDBLite consensus disorder prediction 258 300 - -
Alju10g0477 568 SUPERFAMILY WRKY DNA-binding domain 328 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju10g0477 568 MobiDBLite consensus disorder prediction 97 122 - -
Alju10g0477 568 MobiDBLite consensus disorder prediction 244 312 - -
Alju10g0477 568 MobiDBLite consensus disorder prediction 206 229 - -
Alju10g0477 568 ProSiteProfiles WRKY domain profile. 331 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0477 Alju-ChrAlju10 3842166 3850210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0477 84 554 WRKY Transcription Factor Family AT1G62300 41.879 7.60e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju10g0477 WRKY 9.6e-24 CL0274