Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0470 ATGGAGGCACCTTACCCTGGTTTTCGCTTTTACCCTACGGAAGAAGAGCTTGTCTCCTTCTACCTCCACAACAAGCTTCAAGGTCTCAGACCCGACATGGACAGAGTCATCCCTGTTGTTCAAATTCACGACGTCGAGCCTTGGAACCTCCCACAGCTTGCCGGAGAGGTGTGTCGTGGAGATACAGAGCAGTGGTTCTTCTTCTCGCCCAGACAAGAAAGAGAAACAAGAGGAGGGAGGCCCAACAGAACCACTGCTTCCGGATACTGGAAGGCCACCGGTTCTCCTGGTTACGTTTACTCTTCCGATAACAGAGTCATCGGAGTTAAGAAAACGATGGTCTTTTACAGAGGCAAAGCTCCCACCGGAAGAAAGACGAAGTGGAAGATGCATGAATACAGAGCCATTGAACCCTCCAACTCTAACCAATCCGCCGCCTCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTGATATCGGGGAGCTTCAGAGCATTTGATCGGCGGCCATTAGAGGCGGGGTTTCAAGGCGACGGAGCTTCTGGTTCAGGTGGTGCAACTGGTATTCATGGGGAAGGTGGAAGAAGCTCGTCGGACGCTTCAAACTCAGGAGCAGAGCACGCAGAAGCAGGAGGAGGATCGAGTAGTACAAATCGGAATAATGTGAATGACGAGAAGATTGTACAAGAGCCTCTGTGGGAATGGGAACAGCTAAATTGGCTTTGA 738 0.5108 MEAPYPGFRFYPTEEELVSFYLHNKLQGLRPDMDRVIPVVQIHDVEPWNLPQLAGEVCRGDTEQWFFFSPRQERETRGGRPNRTTASGYWKATGSPGYVYSSDNRVIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIEPSNSNQSAASIPTLRHEFSLCRVYVISGSFRAFDRRPLEAGFQGDGASGSGGATGIHGEGGRSSSDASNSGAEHAEAGGGSSSTNRNNVNDEKIVQEPLWEWEQLNWL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0470 245 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Alju10g0470 245 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Alju10g0470 245 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Alju10g0470 245 MobiDBLite consensus disorder prediction 198 229 - -
Alju10g0470 245 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Alju10g0470 245 MobiDBLite consensus disorder prediction 178 232 - -
Alju10g0470 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0470 Alju-ChrAlju10 3811722 3812835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0470 7 244 NAC Transcription Factor Family AT5G22380 58.996 4.81e-92 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g0470 NAM 4.3e-33 No_clan