Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0453 ATGAAAATCTGCATGCTGGGAGATGCTCAACACGTAGAAGAGGCTGAGAAGATAGGGTTGGACTATATGGATGTTGAAGCGCTGAAGAAGCTGAACAAAAACAAGAAACTGGTTAAGAAGCTTGCCAAAAAATTCCACGCCTTTTTAGCTTCTGAAGCTGTCATTAAGCAGATTCCCCGTCTTTTGGGCCCTGGTCTCAACAAGGCAGGGAAATTCCCCACACTTGTTACTCACCAAGAATCTCTCGAGTCTAAGGTTAATGAGACCAAGGCCATGGTGAAGTTTCAGCTGAAGAAGGTACTTTGCATGGGAGTTGCTGTGGGGAATGTTAGTATGGAGGAAAAACAAATCTTCCAAAATGTACAAATGAGCGTCAACTTCCTTGTTTCCTTGTTGAAGAAGAACTGGCAAAATGTTAGGTGCTTGTATCTCAAGAGCACAATGGGGAGATCCTATCGCGTCTTTTAA 468 0.4338 MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKFHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRSYRVF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0453 155 FunFam Ribosomal protein 76 153 - -
Alju10g0453 155 Gene3D - 1 93 IPR016095 -
Alju10g0453 155 Pfam Ribosomal protein L1p/L10e family 1 149 IPR028364 -
Alju10g0453 155 CDD Ribosomal_L1 1 154 IPR028364 -
Alju10g0453 155 ProSitePatterns Ribosomal protein L1 signature. 55 74 IPR023673 -
Alju10g0453 155 SUPERFAMILY Ribosomal protein L1 1 155 IPR023674 -
Alju10g0453 155 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 14 149 - -
Alju10g0453 155 FunFam Ribosomal protein 4 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0453 Alju-ChrAlju10 3652989 3654625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0453 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G22440 94.194 2.86e-90 260