Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0426 ATGTATGGTGAGGGTTTTAACTTTGCCGAGCTCGTATTAATAACAAGAGAGAGCCAACGAAGGCACGACTCTTACTCCGTCTCTCCCAGGTCGTCTTTACAGAACTCAGCCAGGGCAGAGATGAAGGTGATTGCAGCTTATTTGTTGGCAGTTTTGGGAGGAAACACATCCCCCTCGGCTGATGATATAAGGCATATTCTTGGCTCAGTTGGGGCTGAGGCTGATGAAGAGAGAATTGAGCTTCTCTTAAATGAAGTTAAGGGCAAAGATGTTACCGAACTAATTGCTTCTGGAAGAGAAAAGCTGGCTTCAGTTCCAGCCGGTGGAGGTGTGGTTGCTGCCGTTGCTGCACCTGCAGGAGGCGCTGCAGCTGGTGGAGCTGCACCTGCTGCAGAGGCAAAGGAGGAAAAGAAGGTGGCAGAGAAAGAGGAGTCTGATGAGGACATGGGTTTCAGCTTATTCGACTAA 468 0.4957 MYGEGFNFAELVLITRESQRRHDSYSVSPRSSLQNSARAEMKVIAAYLLAVLGGNTSPSADDIRHILGSVGAEADEERIELLLNEVKGKDVTELIASGREKLASVPAGGGVVAAVAAPAGGAAAGGAAPAAEAKEEKKVAEKEESDEDMGFSLFD 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0426 155 FunFam 60S acidic ribosomal protein P2 38 99 - -
Alju10g0426 155 MobiDBLite consensus disorder prediction 131 149 - -
Alju10g0426 155 CDD Ribosomal_P2 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
Alju10g0426 155 MobiDBLite consensus disorder prediction 122 155 - -
Alju10g0426 155 Hamap 50S ribosomal protein L12 [rpl12]. 42 155 IPR027534 GO:0003735|GO:0005840|GO:0006414
Alju10g0426 155 Gene3D - 40 99 IPR038716 -
Alju10g0426 155 Pfam 60s Acidic ribosomal protein 57 154 - -
Alju10g0426 155 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 41 155 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0426 Alju-ChrAlju10 3401775 3406040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0426 41 155 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.217 2.78e-33 112