Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0420 ATGGATTTTGAGAATGGATCTTCTTCTTCTTCTTCTCCATGTTCAACGCCAAAACCGAGCTCTGCTTCATCTCACAAAAGGAAAGCAGGAAGAAACAAATTTCGGGAGACTCGACATCCATTCTTTCATGGTGTCCGGCGAAAAAACGGCGACCGGTGGGTTAGTGAAGTCCGGGAACCCAACAAGAAGTCCAGGATTTGGCTGGGCACTTACCCTAATCCAGAAATGGCGGCTAGGGCACATGACGTGGCTGCTCTAGCTCTCCGAGGCAGCTCGGCTGCTCTCAATTTCCCCGACTTGGCTCGGCTCCTACCGGCTGCCACCTCATCCTCCGCCCACGACATCAGAGCAGCCGCGGCTGAAGCAGCCCATGCTTTCAGACCAACCGCCACCTCCTCAAATGCTCTTCATCACAACATTAATAATACAAAGCCTTTGTCAGTTGAAGATAATAAGCAAAAGAGGGATGAAGAAGGTGATGATGAGTTCTTGGACGAGGAAGCATTGTATAACATGCCGAGTCTGTTACGTCATATGGCGGAGGGCTTGCTTCTTAGCCCTCCTTTTGTCTGCCGGAGGACCTTAGGTCTCGGTTTGGACGACGACGACGACTTTACTTGTCAAATAGACTTGACTTTATGGCCAGTCGACTAA 654 0.5031 MDFENGSSSSSSPCSTPKPSSASSHKRKAGRNKFRETRHPFFHGVRRKNGDRWVSEVREPNKKSRIWLGTYPNPEMAARAHDVAALALRGSSAALNFPDLARLLPAATSSSAHDIRAAAAEAAHAFRPTATSSNALHHNINNTKPLSVEDNKQKRDEEGDDEFLDEEALYNMPSLLRHMAEGLLLSPPFVCRRTLGLGLDDDDDFTCQIDLTLWPVD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0420 217 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 MobiDBLite consensus disorder prediction 130 161 - -
Alju10g0420 217 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 MobiDBLite consensus disorder prediction 1 43 - -
Alju10g0420 217 Pfam AP2 domain 43 90 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 MobiDBLite consensus disorder prediction 1 23 - -
Alju10g0420 217 MobiDBLite consensus disorder prediction 130 147 - -
Alju10g0420 217 PRINTS Ethylene responsive element binding protein signature 80 100 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 Gene3D AP2/ERF domain 42 99 IPR036955 GO:0003700|GO:0006355
Alju10g0420 217 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 214 IPR045277 GO:0003700
Alju10g0420 217 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Alju10g0420 217 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0420 Alju-ChrAlju10 3359710 3360363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0420 9 217 AP2-EREBP Transcription Factor Family AT5G51990 47.867 1.43e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju10g0420 AP2 5.2e-11 CL0081