Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0401 ATGAACCTCGTATTATCTATCAAATTATTTGTTCTCTGTTCTCGCACGATGGCAGCGAAGTCAGTTTCTGCCTTTCTGCTAAAAAGACAGATCCTTCTTCTGGCGCCTTTTACTGCGCATTCAAACTCCATATCTTCCTTCAGCTTCTCCCACAAGCAAAAGGACTGTACGGTCACGCCATCTTTGAACTCCCCGCAGACCGAACAACACATGGCAAGTACGGCCGACATTAACGGGCCCTCTCTTGCCGTTGGGATCCAGAACTCCGCCGCCGGAGGAAATTCCGAGGCTTCCGGTTCGGACGTTGGGTTGAAGAGGAAAAGAGGAAGGCCTCGGAAGTACGATGAAAACCTTCCGTCACCAAATTCGGCGCCGCCAGGATTTCCAACCTCTCCATCTTCTAAGCGAGGCAGAGGAAGGCCACGTGGCTCTGGAAAATTGCAGATGCTAGCTTCAATGGGAGGAATATTTTCAGCCACTGCTGGAGGAGGCTTCATCCCTCATGTACTGATTGTGAATCCTGGGGAGGATGTTGTGAAAAACATAATATCATTTTCTCCTAAAGGCCATCGTGCTCTTTGCATACTCTCAGCTATTGGAGCTGTCAATGTTGCCGAAATTCTGCAACCTGATTCTTGTGGTCCTCGTCGTGTGAGATATGAGGGTATCTTTGAGATAATAAATTTATCTGGATCATATACCTACGGTGATCAAAATCAGACAAATCTCGCCATGAGGATTTCACTAGCTAAACCTGATGGGATGATTTTCGGAGGTGCAATTGGGGGCTCACTGATAGCGGCTGCCCCTATTCAACTAATTCTGGGCAGTTTTAAGCAAAACATCAGTAGTGATATCAAAAGGCGGCTGTCCCCTGGAGATTCTTCTGGTGCTGCCGACGACGCGCCTGGCAATTCAGATGCAGCGAGGCTTTCACTACAAATTCCTAGATTGATAGAATCTGAACAGGGCTTTCCTTCACCAACATCTGGACTTATGCCAACATCTAATGGATTGGCTGATCATTCCTTGCCTAGAACATCTAATGGATTTCCAAACAACGTCAGTGCTACGACAACTAATGGTAATGGTTTAGCAGATTTTTTTCCTCTGAGTCAGAGCATGCCCTCGACCTCATTGAATGGCAGTAGTCTAGACTGTCATGTCTTGCAGCCCTTCTCAGATCCAATGACATTTGGAGATATTAATAATAGTGTCTCTCATATGTGA 1230 0.465 MNLVLSIKLFVLCSRTMAAKSVSAFLLKRQILLLAPFTAHSNSISSFSFSHKQKDCTVTPSLNSPQTEQHMASTADINGPSLAVGIQNSAAGGNSEASGSDVGLKRKRGRPRKYDENLPSPNSAPPGFPTSPSSKRGRGRPRGSGKLQMLASMGGIFSATAGGGFIPHVLIVNPGEDVVKNIISFSPKGHRALCILSAIGAVNVAEILQPDSCGPRRVRYEGIFEIINLSGSYTYGDQNQTNLAMRISLAKPDGMIFGGAIGGSLIAAAPIQLILGSFKQNISSDIKRRLSPGDSSGAADDAPGNSDAARLSLQIPRLIESEQGFPSPTSGLMPTSNGLADHSLPRTSNGFPNNVSATTTNGNGLADFFPLSQSMPSTSLNGSSLDCHVLQPFSDPMTFGDINNSVSHM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0401 409 SUPERFAMILY AF0104/ALDC/Ptd012-like 166 280 - -
Alju10g0401 409 ProSiteProfiles PPC domain profile profile. 162 304 IPR005175 -
Alju10g0401 409 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 72 329 IPR039605 GO:0003680
Alju10g0401 409 MobiDBLite consensus disorder prediction 101 115 - -
Alju10g0401 409 Gene3D - 167 293 - -
Alju10g0401 409 MobiDBLite consensus disorder prediction 85 146 - -
Alju10g0401 409 MobiDBLite consensus disorder prediction 287 307 - -
Alju10g0401 409 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 279 IPR005175 -
Alju10g0401 409 CDD DUF296 167 278 IPR005175 -
Alju10g0401 409 SMART AT_hook_2 105 117 IPR017956 GO:0003677
Alju10g0401 409 SMART AT_hook_2 135 147 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0401 Alju-ChrAlju10 3186786 3192075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0401 100 278 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 44.615 1.24e-42 149