Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0380 ATGGCTATTGTTGGTGTGCACAATGTGTCAGTGCTTGACTCTTCTTTCCTTAGGGACTCTCATTCTCAATCGTCAAGTAGGCATGGAGATGGAAGCAGGGGAAACTCTCAGTCATCTTCTTCACTTTTGCAGCTATGGCAAGAGATTGAGGATAAGCGCGAGGAGCTAAACAATTCTAGCTGTGAAAACTCTTCTGATCTTGGAGATCTTGAAAGGGAAAGAGTAAGGAAAATTTTCAGAGAATGGATGAACAGTACTGGTGCTAGAGATGAAGCATCCACCATTTCCATCAGACATAACAATCCTAGGGAAGAGTGGCTTGGCGAAACAGAGCAAGAGAGAGTGAGAATCATAAGGGAGTGGGTGCAAATGAGTAGCCAGAAACAGAGTGGTGTTTCTTCTGGGGACAATAGAGAGGAGCAATCTGCAGAAATTGAACGTGTTCGTAATGGATTTGTGATGAACAAAAATGAAGGCCAGAGTGAGCAAACTCGTAGGGGGATTCGAAAATTATGTGGCAGACAGGTTTTGCTTGATATGCTAAACAAGGCTGAGAGAGAAAGGCAGAGAGAAGTTCAGGAGTTGTTAGACCAGAGGGCTGTGTCTCAATTTCCACATCGCAATCGAATTCAGGCTTTGCTGAGAGGCAGGTTTCTGAGAAATGATAGAGTTGCTGATAAGAAAAGGACCACTTCTGTGTCGGATCGTGAATTAGGCTTATTGAGGCAAAAGCAGACTGTATCAGGTTTAAGGGAAGGATTCTTCTCCAGAAAGAACATTTCTGGTTGCAGCTTAGAAAGCAACAATTTAATTGATACCTCATCAAACAGTGACATTGATGAAGCCAGCAGTTCACGAAGTTCCCCAAATGTATACTCCAAACCATCTGAGCCCAATTATCAAGCAACTGATATAACTCAGATATCAGGTGATCACATTTGTCTGCAGAGACCTCCCCTTGAGAAATTAGAATGGCAAGAATCCCCTGCTCCTGTCGAAGCAGAGGGACCACAGGATTTGAAAACTGAATCAAGAGATTTCCAGTCACCAACCAATGTTGGGATCGAAACAAGAGATGATGACTCTCCACAAAGTGCTCATGTGGTGTCAACTGAAAAAGATACATCTAAGGAACTTTCCCCATCATGTTTTCCAGTTGAAGATACAGAGCATTGCTCTGTGCCGATATTCAGTGAGGAGGACCATAACGAACAGTCTGATCATGGATATTATTCAGAGGGAAATATCACTGATGAAGATAACTTGAATGAAAATGTTGCTCTGGAAGGAGAGCTTCCCATAGATTTTGGAAATGATGGAAGTGAAAGTCTTCCACTTGATGCTGAACAGAGAGACAACACTGAGGAAAGTATGGATCTTAATCATCCAACTTCTACAGCAAACGAGAGGCCCCAACACATGTTGCAGAACGAAGATGACCAAGACCTTCATGTTCAAGAAGCATCTGAATTGCGGCAACAAGATGATAACTCGCAAGAACCGGTTGAGAATTTTTCAGGAGGAGCTTCTGATCATGAAGATGCTGCTACAGTTGGCGGAACTCATGTAGTTTATTTTTCTGATGATGACAATGCGCATAGCGGAGAACTCAATGAACTGTTAAATAGGAGACGTGTTTCTAATCTCCTTAGCAGTAGTTTTCGTGAGAATCTGGATCAGTTGGTACGATCATATGTTGAAAGACAGAATCATGCTCAAATGGAGTGGGAGCTGCAAGAGGAAGAAGAAGAAGAAGGCGGCTTCGTGGAGCAGCAAGCTATGGATCAGATTGTTGGTCAAGATGGTCCTTCTGAAAGCCCCACTTACTTACCCTCATCACCAACTCAATCTTCTCGACCATTTTGGGACCAACAAAATGACATGAATAATCAACATAATGGAATGGAGTGGGAGATTATTAATGGCTTAAGGATTGACATGGCTGTGCTACAACAGAGGGTGAATGAAATGCAGAGAATACTGGAAGCCTGCATGGATATGCAGCTTGAGCTGCAGCGTTCATTGAGGCAAGAAGTTTCTGCTGCACTACTTAATTGCTCAGATAATGGGCCCACGAGATTCCAAGACCATGATTCCCAAAATGATGATAACTCAAAGTGGGAGTGTGTGAGGAAAGGGCTCTGCTGTATATGTTGTGAGAGACATATTGATTCTCTATTGTACAGATGTGGGCACATGTGTATGTGTTCAAAATGCGCAAAAGAATTGTTACAGAGCAAGAGAAAGTGCCCGATGTGTCAAGCACCTGTGGTGGAAGTGATACATGCTTATTCCATACTCTAA 2304 0.4293 MAIVGVHNVSVLDSSFLRDSHSQSSSRHGDGSRGNSQSSSSLLQLWQEIEDKREELNNSSCENSSDLGDLERERVRKIFREWMNSTGARDEASTISIRHNNPREEWLGETEQERVRIIREWVQMSSQKQSGVSSGDNREEQSAEIERVRNGFVMNKNEGQSEQTRRGIRKLCGRQVLLDMLNKAERERQREVQELLDQRAVSQFPHRNRIQALLRGRFLRNDRVADKKRTTSVSDRELGLLRQKQTVSGLREGFFSRKNISGCSLESNNLIDTSSNSDIDEASSSRSSPNVYSKPSEPNYQATDITQISGDHICLQRPPLEKLEWQESPAPVEAEGPQDLKTESRDFQSPTNVGIETRDDDSPQSAHVVSTEKDTSKELSPSCFPVEDTEHCSVPIFSEEDHNEQSDHGYYSEGNITDEDNLNENVALEGELPIDFGNDGSESLPLDAEQRDNTEESMDLNHPTSTANERPQHMLQNEDDQDLHVQEASELRQQDDNSQEPVENFSGGASDHEDAATVGGTHVVYFSDDDNAHSGELNELLNRRRVSNLLSSSFRENLDQLVRSYVERQNHAQMEWELQEEEEEEGGFVEQQAMDQIVGQDGPSESPTYLPSSPTQSSRPFWDQQNDMNNQHNGMEWEIINGLRIDMAVLQQRVNEMQRILEACMDMQLELQRSLRQEVSAALLNCSDNGPTRFQDHDSQNDDNSKWECVRKGLCCICCERHIDSLLYRCGHMCMCSKCAKELLQSKRKCPMCQAPVVEVIHAYSIL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0380 767 MobiDBLite consensus disorder prediction 393 408 - -
Alju10g0380 767 Coils Coil 640 660 - -
Alju10g0380 767 CDD mRING-HC-C3HC5_NEU1 715 764 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 598 628 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 343 359 - -
Alju10g0380 767 Coils Coil 174 201 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 489 514 - -
Alju10g0380 767 Pfam Zinc finger, C3HC4 type (RING finger) 712 759 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 360 374 - -
Alju10g0380 767 ProSiteProfiles Zinc finger RING-type profile. 715 754 IPR001841 -
Alju10g0380 767 MobiDBLite consensus disorder prediction 328 418 - -
Alju10g0380 767 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 767 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 432 470 - -
Alju10g0380 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 691 765 IPR013083 -
Alju10g0380 767 MobiDBLite consensus disorder prediction 266 301 - -
Alju10g0380 767 SUPERFAMILY RING/U-box 714 760 - -
Alju10g0380 767 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0380 Alju-ChrAlju10 3039899 3043673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0380 715 761 C3H Transcription Factor Family AT3G06140 44.681 1.22e-07 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0263 02 1993357 1996910 Alju10g0380 10 3039899 3043673 CCT
Alju10g0380 10 3039899 3043673 Alju10g0380 10 3039899 3043673 ECH