Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0377 ATGGCTAACGGTAAGGATTCCGACGAGTTCCTGGTGTTGTCGAGGGTCCGGACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCCGAGATCTGTGGATCTCTGGGACGGACACGTGCCAGCAAAATAAAGAATGGGGTTCAAGAAACTCCCAGCAACAAGAGGTCCAAGAAATCTGGCTCATCTAGGGCTAAGAGAGATGAGCCGAATGGTGTGAAGCCTGTGCCGGAGGATGTTGTCGAACCCATTGTTTTGGAAGAGGTCAAAGGAAAGGAGGTAAACGCTGTAGAGGATATGGAGGATGTTATGAGCGAGGAGGAGGCAAAAAGCGATGTGGTGGATTTATCGGGTGACGACGAACCCAAGAACCCAGTGGGTGAGTCGATGGGCAAGAGGGAACCTATGGATTGTGATGAGGAGCCCAAGGGCGATGATGTAGAAACTGTAAGCGACGATGAGCCGAAAAGTATTCCAATGTCAGAATCATTGAAGGAAGCAACAATGGATGATATAGCGCAACCCATTTGCCAACCCGAGTCGAAGGAACATCAAAAAAACGAAGACGATATACAGAAGTCTTTAACCACTGAGAACTTGAGCGGGGGAGAGACATGTTCTCCAGATGAAAAGGGTGTTATTGTGACTACTCCTGTTTCGCTTAATGATGACAATAAGGTGAAGGCAATTGTAGGGGGTCCAGTGAGGAGGTTTACGCGGTCTGCTCTGAGACAACAGCAAGATGATTCGAAGCTCTCAACTGATGGAAAAGAAGCTTGTGATACAGCCATTGGACTTGGTGATGTTAGGAGGGAAAGTGAAGATGATTCATTAATCGCTACGCCTCAAACAAGAAGGTCGAAGAATAATGCCTCGAAGAAGTTCCCTTCGAAGCTCAAGGACCTTCTAGCCACGGGGATTCTTGAAGGGCTGCCTGTCCATTATGTTCGGGGGGTGAAGACGCGAAGGCCTGGAGAAACAGGGCTCCGAGGAGAGATTAGAGGCTCTGGGATTTTGTGCTATTGCGAAGTTTGTAACGGGGTTGAGGTTGTATCACCCACAGTGTTTGAACTGCACGCTGGTAGTGCAAACAAACGGCCCCCAGAGTACATATACCTTGAGAATGGGAATACGCTCCGTGATGTCATGAATACATGTTCGAGCGTTGCAATGGATGTTTTGGAGGAATCAGTACAGAAAATCCTCGGGGACTTCACATTTAAGAAATCTGCTATCTGTTTGCATTGCAGAGTGGCCATATCTCAAGCTGGCAAGGGATGGTCGAGACTACTCTGCGATACATGCGTGGTCTTTAAAGATTCTCAACCTAGCCCTGTTCAAATAGCTGAGGCTAGCAATTCCTGTTCTTCACCTGTAGTTACTCTAAGGTCTCCTGAACCAGTTGTCGTTCCATCAATATTAAACAGTGGGATGAAGCATTCCAACTATTCTAGGTCTTCAGAACCAGTTGTTCCATCAACTTTAAACAGTGGGATGAAGCACACTACTTCTCGTGGCAAGAGTCAAGGGAGAATAACTAAAAAGGATCTTCGATTGCATAAACTGGTTTTTGAGGAAGATGTGTTGCCTGATGGAACTGAAGTTGCCTACTATGCTCGTGGGCAGAAACTGTTGGTGGGTTACAAAAAGGGGTTTGGAATTATTTGTAGCTGCTGTGACTCTGAGGTGAGCCCCTCACAATTTGAAGCTCATGCTGGTTGGGCATCGCGACGCAAGCCTTATCTGCATATATACACATCCAATGGTGTCTCTCTCCACGAATTGTCCATTTCTCTATCAAGAGGTCGGAGGTTTTCTACAAATGAAAATGATGATCTCTGCAGCATCTGCTCAGATGGAGGGAATCTTTTGTGTTGTGATGGATGTCCAAGGGCTTTTCACATAGACTGTGTTCCTCTGCCATGTATTCCAACTGGAACTTGGTATTGTAAATATTGCCAGAACGTGTTCCAAAAAGACAAATATGTGGAGCATAACATGAATGCATTGGCAGCAGGAAGGATTGCAGGGGTTGATCCTTTAGAACAGATAAATCAAAGATGTATTCGCATAGTCAAAACTGTCGAGGTTGACCATGGTGGATGTGCATTATGCAGAAGCCATGATTTCAGCAAAATCTTTGGTCCTCGAACAGTGATTATATGTGATCAGTGTGAAAGGGAATATCATGTAGGCTGTTTGAAGGAGCATAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGCACTGATTGCAGTCGGATTCATTCTGCTCTGCTTAATATGGTCTCTTGTGGGGCAGAGAATCTTCCAGATTCTCTATTAAGTATGATACAAAAGAAGCATGAAGGGAAGGGCCTGGAAAATGGGCATGGTTTAGATATAAAATGGAGAATCTTAAATTGGAAACTGGCTGCTTCTGATGAAACAAGGCAACTGCTTTCGAAGGCTGTTGCAATCTTCCATGAGCGGTTTGATCCAATAGTTGATTCAAGTTCTGGTCGTGATTTCATTCCAACAATGCTTTATGGAAGGAACATTAGGGGTCAAGATTTTGGTGGGATGTATTGTGCAGTGCTAACAGTGAATGAAGTGGTTGTTTCTGCGGGTGTATTTCGTATATTTGGGGCAGAGGTGGCAGAGCTTCCATTAGTGGCAACAGTTGCAGATTGCCAAGGAAAGGGTTACTTCCAGTCCCTGTTTTCTTGCATTGAAGGGCTGCTTGGATCTTTGAATGTGAAACATTTCGTCCTACCAGCTGCTGAAGAAGCGGAATCAATATGGACGAGTAAATTTGGTTTTACCAAGTTAGAACAAGATAAGGTGAACGATTATAAGAGATTTTATCACATGATGATATTTCAAGGGACCTCAGTGCTGTGGAAGTCAGTTCCTGTTCCACCAGAATTGTGCGTCAATGCGGTGTAG 2946 0.4511 MANGKDSDEFLVLSRVRTGLKREFAFAMKAQSEICGSLGRTRASKIKNGVQETPSNKRSKKSGSSRAKRDEPNGVKPVPEDVVEPIVLEEVKGKEVNAVEDMEDVMSEEEAKSDVVDLSGDDEPKNPVGESMGKREPMDCDEEPKGDDVETVSDDEPKSIPMSESLKEATMDDIAQPICQPESKEHQKNEDDIQKSLTTENLSGGETCSPDEKGVIVTTPVSLNDDNKVKAIVGGPVRRFTRSALRQQQDDSKLSTDGKEACDTAIGLGDVRRESEDDSLIATPQTRRSKNNASKKFPSKLKDLLATGILEGLPVHYVRGVKTRRPGETGLRGEIRGSGILCYCEVCNGVEVVSPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSSVAMDVLEESVQKILGDFTFKKSAICLHCRVAISQAGKGWSRLLCDTCVVFKDSQPSPVQIAEASNSCSSPVVTLRSPEPVVVPSILNSGMKHSNYSRSSEPVVPSTLNSGMKHTTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIICSCCDSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSRGRRFSTNENDDLCSICSDGGNLLCCDGCPRAFHIDCVPLPCIPTGTWYCKYCQNVFQKDKYVEHNMNALAAGRIAGVDPLEQINQRCIRIVKTVEVDHGGCALCRSHDFSKIFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCSRIHSALLNMVSCGAENLPDSLLSMIQKKHEGKGLENGHGLDIKWRILNWKLAASDETRQLLSKAVAIFHERFDPIVDSSSGRDFIPTMLYGRNIRGQDFGGMYCAVLTVNEVVVSAGVFRIFGAEVAELPLVATVADCQGKGYFQSLFSCIEGLLGSLNVKHFVLPAAEEAESIWTSKFGFTKLEQDKVNDYKRFYHMMIFQGTSVLWKSVPVPPELCVNAV 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0377 981 ProSitePatterns Zinc finger PHD-type signature. 616 655 IPR019786 -
Alju10g0377 981 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 698 761 IPR013083 -
Alju10g0377 981 PANTHER AUTOIMMUNE REGULATOR 74 969 - -
Alju10g0377 981 Gene3D - 800 968 - -
Alju10g0377 981 MobiDBLite consensus disorder prediction 37 213 - -
Alju10g0377 981 CDD PHD1_AIRE 615 655 - -
Alju10g0377 981 Pfam Tify domain binding domain 333 388 IPR032308 -
Alju10g0377 981 Pfam Tify domain binding domain 549 597 IPR032308 -
Alju10g0377 981 MobiDBLite consensus disorder prediction 64 101 - -
Alju10g0377 981 ProSiteProfiles Zinc finger PHD-type profile. 613 658 IPR019787 -
Alju10g0377 981 MobiDBLite consensus disorder prediction 109 142 - -
Alju10g0377 981 FunFam PHD finger family protein 800 969 - -
Alju10g0377 981 SMART PHD_3 703 759 IPR001965 -
Alju10g0377 981 SMART PHD_3 615 656 IPR001965 -
Alju10g0377 981 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 602 679 - -
Alju10g0377 981 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 681 IPR013083 -
Alju10g0377 981 MobiDBLite consensus disorder prediction 483 513 - -
Alju10g0377 981 MobiDBLite consensus disorder prediction 483 508 - -
Alju10g0377 981 MobiDBLite consensus disorder prediction 44 60 - -
Alju10g0377 981 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 859 957 IPR016181 -
Alju10g0377 981 SUPERFAMILY FYVE/PHD zinc finger 695 760 IPR011011 -
Alju10g0377 981 SUPERFAMILY FYVE/PHD zinc finger 604 657 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0377 Alju-ChrAlju10 3007555 3013268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0377 298 970 PHD Transcription Factor Family AT2G36720 47.420 0.0 648