Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0357 ATGGGAAGAGCTCCTTGCTGTGACAAAGCAAATGTGAAGAAGGGGCCATGGTCACCAGAAGAAGACACAAAGCTGAAAGAGTACATAGAGAAGAACGGAACAGGAGGTAATTGGATCGCTCTTCCTCAGAAAGCAGGTCTAAAAAGGTGTGGGAAAAGTTGTAGATTGAGGTGGCTCAACTATCTGAGGCCCAACATTAAGCACGGCGAATTCTCTGATGATGAAGACAGAATAATATGCACCCTCTATGCTAATATTGGAAGCAGGTGGTCAATTATAGCAGCTCAGTTGCCAGGGAGGACAGACAATGATATCAAGAACTACTGGAACACCAAGCTCAAGAAGAAGCTCATGGGTTTGCTTCCTCCATCGTCTAATCACCAGATCAGGAATAAACCTACTGCAACATTATTTCATGAATCCTCTCATCTTCATAATGATCATCAAAACCCACCTTTTTCTTCATCATACAGAGACTTTAGCTCTTCTTATTACTACCCTAGCCCATCATCAACTATATCCTTCACAGGCGTAGAGTCCACTTCTGTTATGCCTTCAACCACCAATAATTTTCCTTATTTTCAAAACCAAGAAGCCTCTTTGGTCAGTCCATCAATGCAATACTACTACAACATATTTGGAAGTGAAGGAAGTTGCAGCACTTCTTCAGATGGAAGCTGCAGTCAAATCAGCCATGGAGGAAGAGGAGACGTCAAACAAGAAGAGATGGGTTTTCATCAATTCCATCATCAAAACTTCAACAACATGTCCAATGGTAATGGTGGGTTTGATCATCATCATCATGAGTTGAGCAACAATAACAAGTTCATACCCGGAGGTGAAACTAGCACTATTAACCAGTGGACATCGTCAGAGAAGCCAAGTGATCAGTACTTTGGGCAAACGCCATTATTAATGGAGTATGGAATTGAGGAGATAAAGCAGGTGATCAGTGGTCATAACAATAATAATAATAATATTGAGGAAAACAAGAGAGAGGAGGGGATGATGTACTCCTACTACGGATGA 1029 0.4159 MGRAPCCDKANVKKGPWSPEEDTKLKEYIEKNGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPPSSNHQIRNKPTATLFHESSHLHNDHQNPPFSSSYRDFSSSYYYPSPSSTISFTGVESTSVMPSTTNNFPYFQNQEASLVSPSMQYYYNIFGSEGSCSTSSDGSCSQISHGGRGDVKQEEMGFHQFHHQNFNNMSNGNGGFDHHHHELSNNNKFIPGGETSTINQWTSSEKPSDQYFGQTPLLMEYGIEEIKQVISGHNNNNNNIEENKREEGMMYSYYG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0357 342 CDD SANT 70 111 IPR001005 -
Alju10g0357 342 Coils Coil 310 330 - -
Alju10g0357 342 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Alju10g0357 342 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Alju10g0357 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Alju10g0357 342 FunFam Transcription factor RAX3 7 68 - -
Alju10g0357 342 SMART sant 13 64 IPR001005 -
Alju10g0357 342 SMART sant 67 115 IPR001005 -
Alju10g0357 342 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Alju10g0357 342 PANTHER OS09G0431300 PROTEIN 1 277 - -
Alju10g0357 342 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Alju10g0357 342 CDD SANT 16 62 IPR001005 -
Alju10g0357 342 Gene3D - 69 136 - -
Alju10g0357 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Alju10g0357 342 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju10g0357 342 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0357 Alju-ChrAlju10 2832883 2834367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0357 1 119 MYB Transcription Factor Family AT5G57620 89.076 3.93e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0357 Myb_DNA-binding 8.8e-14 CL0123